Gene : Phvul.003G235700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR32370:SF26 - BTB/POZ DOMAIN-CONTAINING PROTEIN NPY3-RELATED Genomic Order:  2392
Name:  ? Phvul.003G235700 Secondary Identifier:  ? PAC:37145868
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G235700 0.5kb upstream 0.5kb upstream 7240 true Chr03: 46912116-46919355 Phaseolus vulgaris
Phvul.003G235700 0.5kb upstream 0.5kb upstream 500 false Chr03: 46912116-46912615 Phaseolus vulgaris
Phvul.003G235700 0.5kb downstream 0.5kb downstream 7240 true Chr03: 46912616-46919855 Phaseolus vulgaris
Phvul.003G235700 0.5kb downstream 0.5kb downstream 500 false Chr03: 46919356-46919855 Phaseolus vulgaris
Phvul.003G235700 1.0kb upstream 1.0kb upstream 7740 true Chr03: 46911616-46919355 Phaseolus vulgaris
Phvul.003G235700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 46911616-46912615 Phaseolus vulgaris
Phvul.003G235700 1.0kb downstream 1.0kb downstream 7740 true Chr03: 46912616-46920355 Phaseolus vulgaris
Phvul.003G235700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 46919356-46920355 Phaseolus vulgaris
Phvul.003G235700 2.0kb upstream 2.0kb upstream 8740 true Chr03: 46910616-46919355 Phaseolus vulgaris
Phvul.003G235700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 46910616-46912615 Phaseolus vulgaris
Phvul.003G235700 2.0kb downstream 2.0kb downstream 8740 true Chr03: 46912616-46921355 Phaseolus vulgaris
Phvul.003G235700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 46919356-46921355 Phaseolus vulgaris
Phvul.003G235700 5.0kb upstream 5.0kb upstream 11740 true Chr03: 46907616-46919355 Phaseolus vulgaris
Phvul.003G235700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 46907616-46912615 Phaseolus vulgaris
Phvul.003G235700 5.0kb downstream 5.0kb downstream 11740 true Chr03: 46912616-46924355 Phaseolus vulgaris
Phvul.003G235700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 46919356-46924355 Phaseolus vulgaris
Phvul.003G235700 10.0kb upstream 10.0kb upstream 16740 true Chr03: 46902616-46919355 Phaseolus vulgaris
Phvul.003G235700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 46902616-46912615 Phaseolus vulgaris
Phvul.003G235700 10.0kb downstream 10.0kb downstream 16740 true Chr03: 46912616-46929355 Phaseolus vulgaris
Phvul.003G235700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 46919356-46929355 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300314 5265 Fabidae View MSA
124069258 5270 Rosid View MSA
123743807 5271 Pentapetalae View MSA
122790043 5272 Eudicot View MSA
122047329 5273 Angiosperm View MSA
121350883 5274 Embryophyte View MSA
123381921 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.1154 0.0 29.1118   High
cufflinks 3.79922 0.0 12.6878    
cufflinks 8.97354 0.0 26.3442   High
cufflinks 5.60939 0.0 16.9809    
cufflinks 8.07951 0.0 23.7913    
cufflinks 5.81377 0.0 19.6287    
cufflinks 4.95442 0.0 15.543    
cufflinks 3.07693 0.0 10.4863   Low
cufflinks 7.00212 0.0 20.6461    
cufflinks 2.9169 0.0 9.70346   Low
cufflinks 4.53792 0.0 16.2599    

0 Strain