Gene : Phvul.003G177600 P. vulgaris v2.1
Genomic Order:  1801 Name:  ? Phvul.003G177600
Secondary Identifier:  ? PAC:37147148
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G177600 0.5kb upstream 0.5kb upstream 1138 true Chr03: 40112539-40113676 Phaseolus vulgaris
Phvul.003G177600 0.5kb upstream 0.5kb upstream 500 false Chr03: 40112539-40113038 Phaseolus vulgaris
Phvul.003G177600 0.5kb downstream 0.5kb downstream 1138 true Chr03: 40113039-40114176 Phaseolus vulgaris
Phvul.003G177600 0.5kb downstream 0.5kb downstream 500 false Chr03: 40113677-40114176 Phaseolus vulgaris
Phvul.003G177600 1.0kb upstream 1.0kb upstream 1638 true Chr03: 40112039-40113676 Phaseolus vulgaris
Phvul.003G177600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 40112039-40113038 Phaseolus vulgaris
Phvul.003G177600 1.0kb downstream 1.0kb downstream 1638 true Chr03: 40113039-40114676 Phaseolus vulgaris
Phvul.003G177600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 40113677-40114676 Phaseolus vulgaris
Phvul.003G177600 2.0kb upstream 2.0kb upstream 2638 true Chr03: 40111039-40113676 Phaseolus vulgaris
Phvul.003G177600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 40111039-40113038 Phaseolus vulgaris
Phvul.003G177600 2.0kb downstream 2.0kb downstream 2638 true Chr03: 40113039-40115676 Phaseolus vulgaris
Phvul.003G177600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 40113677-40115676 Phaseolus vulgaris
Phvul.003G177600 5.0kb upstream 5.0kb upstream 5638 true Chr03: 40108039-40113676 Phaseolus vulgaris
Phvul.003G177600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 40108039-40113038 Phaseolus vulgaris
Phvul.003G177600 5.0kb downstream 5.0kb downstream 5638 true Chr03: 40113039-40118676 Phaseolus vulgaris
Phvul.003G177600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 40113677-40118676 Phaseolus vulgaris
Phvul.003G177600 10.0kb upstream 10.0kb upstream 10638 true Chr03: 40103039-40113676 Phaseolus vulgaris
Phvul.003G177600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 40103039-40113038 Phaseolus vulgaris
Phvul.003G177600 10.0kb downstream 10.0kb downstream 10638 true Chr03: 40113039-40123676 Phaseolus vulgaris
Phvul.003G177600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 40113677-40123676 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315163 5265 Fabidae View MSA
124068823 5270 Rosid View MSA
123750577 5271 Pentapetalae View MSA
122796382 5272 Eudicot View MSA
122045247 5273 Angiosperm View MSA
121310424 5274 Embryophyte View MSA
123347912 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.0927 0.0 38.4317   High
cufflinks 1.02202 0.0 4.12526    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.932951 0.0 3.74037    
cufflinks 0.398332 0.0 1.74464 Low Low
cufflinks 0.47291 0.0 2.04057 Low  
cufflinks 7.45236 0.0 25.2367    
cufflinks 9.51924 0.0 31.3676   High
cufflinks 12.1998 0.0 39.079   High
cufflinks 2.11479 0.0 8.07411    
cufflinks 0.250909 0.0 1.15599 Low Low

0 Strain