Gene : Phvul.003G234500 P. vulgaris v2.1
Defline:  (1 of 1) K03937 - NADH dehydrogenase (ubiquinone) Fe-S protein 4 (NDUFS4) Genomic Order:  2380
Name:  ? Phvul.003G234500 Secondary Identifier:  ? PAC:37145403
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-3781 Phaseolus vulgaris pathologic  
Pvulgaris PWY-4302 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5083 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G234500 0.5kb upstream 0.5kb upstream 4046 true Chr03: 46799861-46803906 Phaseolus vulgaris
Phvul.003G234500 0.5kb upstream 0.5kb upstream 500 false Chr03: 46803407-46803906 Phaseolus vulgaris
Phvul.003G234500 0.5kb downstream 0.5kb downstream 4046 true Chr03: 46799361-46803406 Phaseolus vulgaris
Phvul.003G234500 0.5kb downstream 0.5kb downstream 500 false Chr03: 46799361-46799860 Phaseolus vulgaris
Phvul.003G234500 1.0kb upstream 1.0kb upstream 4546 true Chr03: 46799861-46804406 Phaseolus vulgaris
Phvul.003G234500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 46803407-46804406 Phaseolus vulgaris
Phvul.003G234500 1.0kb downstream 1.0kb downstream 4546 true Chr03: 46798861-46803406 Phaseolus vulgaris
Phvul.003G234500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 46798861-46799860 Phaseolus vulgaris
Phvul.003G234500 2.0kb upstream 2.0kb upstream 5546 true Chr03: 46799861-46805406 Phaseolus vulgaris
Phvul.003G234500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 46803407-46805406 Phaseolus vulgaris
Phvul.003G234500 2.0kb downstream 2.0kb downstream 5546 true Chr03: 46797861-46803406 Phaseolus vulgaris
Phvul.003G234500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 46797861-46799860 Phaseolus vulgaris
Phvul.003G234500 5.0kb upstream 5.0kb upstream 8546 true Chr03: 46799861-46808406 Phaseolus vulgaris
Phvul.003G234500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 46803407-46808406 Phaseolus vulgaris
Phvul.003G234500 5.0kb downstream 5.0kb downstream 8546 true Chr03: 46794861-46803406 Phaseolus vulgaris
Phvul.003G234500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 46794861-46799860 Phaseolus vulgaris
Phvul.003G234500 10.0kb upstream 10.0kb upstream 13546 true Chr03: 46799861-46813406 Phaseolus vulgaris
Phvul.003G234500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 46803407-46813406 Phaseolus vulgaris
Phvul.003G234500 10.0kb downstream 10.0kb downstream 13546 true Chr03: 46789861-46803406 Phaseolus vulgaris
Phvul.003G234500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 46789861-46799860 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307307 5265 Fabidae View MSA
124063322 5270 Rosid View MSA
123738055 5271 Pentapetalae View MSA
122794189 5272 Eudicot View MSA
122045694 5273 Angiosperm View MSA
121345642 5274 Embryophyte View MSA
123424556 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 51.2258 0.0 132.556 High  
cufflinks 34.5104 0.0 90.5015 High  
cufflinks 38.8674 0.0 101.402 High  
cufflinks 101.468 0.0 265.46 High High
cufflinks 39.0432 0.0 102.166 High  
cufflinks 31.1248 0.0 82.0978    
cufflinks 24.2378 0.0 64.8473   Low
cufflinks 38.669 0.0 100.681 High  
cufflinks 39.4166 0.0 102.541 High  
cufflinks 18.7855 0.0 51.6362   Low
cufflinks 38.5323 0.0 100.611 High  

0 Strain