Gene : Phvul.003G220900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR13402 - RGPR-RELATED Genomic Order:  2238
Name:  ? Phvul.003G220900 Secondary Identifier:  ? PAC:37144553
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G220900 0.5kb upstream 0.5kb upstream 9674 true Chr03: 44938764-44948437 Phaseolus vulgaris
Phvul.003G220900 0.5kb upstream 0.5kb upstream 500 false Chr03: 44947938-44948437 Phaseolus vulgaris
Phvul.003G220900 0.5kb downstream 0.5kb downstream 9674 true Chr03: 44938264-44947937 Phaseolus vulgaris
Phvul.003G220900 0.5kb downstream 0.5kb downstream 500 false Chr03: 44938264-44938763 Phaseolus vulgaris
Phvul.003G220900 1.0kb upstream 1.0kb upstream 10174 true Chr03: 44938764-44948937 Phaseolus vulgaris
Phvul.003G220900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 44947938-44948937 Phaseolus vulgaris
Phvul.003G220900 1.0kb downstream 1.0kb downstream 10174 true Chr03: 44937764-44947937 Phaseolus vulgaris
Phvul.003G220900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 44937764-44938763 Phaseolus vulgaris
Phvul.003G220900 2.0kb upstream 2.0kb upstream 11174 true Chr03: 44938764-44949937 Phaseolus vulgaris
Phvul.003G220900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 44947938-44949937 Phaseolus vulgaris
Phvul.003G220900 2.0kb downstream 2.0kb downstream 11174 true Chr03: 44936764-44947937 Phaseolus vulgaris
Phvul.003G220900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 44936764-44938763 Phaseolus vulgaris
Phvul.003G220900 5.0kb upstream 5.0kb upstream 14174 true Chr03: 44938764-44952937 Phaseolus vulgaris
Phvul.003G220900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 44947938-44952937 Phaseolus vulgaris
Phvul.003G220900 5.0kb downstream 5.0kb downstream 14174 true Chr03: 44933764-44947937 Phaseolus vulgaris
Phvul.003G220900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 44933764-44938763 Phaseolus vulgaris
Phvul.003G220900 10.0kb upstream 10.0kb upstream 19174 true Chr03: 44938764-44957937 Phaseolus vulgaris
Phvul.003G220900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 44947938-44957937 Phaseolus vulgaris
Phvul.003G220900 10.0kb downstream 10.0kb downstream 19174 true Chr03: 44928764-44947937 Phaseolus vulgaris
Phvul.003G220900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 44928764-44938763 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122251525 5265 Fabidae Singleton cluster - no MSA
124072884 5270 Rosid View MSA
123746128 5271 Pentapetalae View MSA
122793039 5272 Eudicot View MSA
122051498 5273 Angiosperm View MSA
121349781 5274 Embryophyte View MSA
123425826 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.05717 0.0 4.18183   Low
cufflinks 1.23426 0.0 4.6804    
cufflinks 0.857973 0.0 3.55815   Low
cufflinks 1.50241 0.0 5.36458    
cufflinks 4.60946 0.0 15.4495   High
cufflinks 1.31716 0.0 4.78554    
cufflinks 4.32548 0.0 14.4812    
cufflinks 4.25221 0.0 14.2333    
cufflinks 1.73015 0.0 6.02639    
cufflinks 5.15746 0.0 16.8806   High
cufflinks 4.06935 0.0 13.851    

0 Strain