Gene : Phvul.003G222200 P. vulgaris v2.1
Defline:  (1 of 1) PF01987 - Mitochondrial biogenesis AIM24 (AIM24) Genomic Order:  2254
Name:  ? Phvul.003G222200 Secondary Identifier:  ? PAC:37146876
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G222200 0.5kb upstream 0.5kb upstream 7126 true Chr03: 45119707-45126832 Phaseolus vulgaris
Phvul.003G222200 0.5kb upstream 0.5kb upstream 500 false Chr03: 45126333-45126832 Phaseolus vulgaris
Phvul.003G222200 0.5kb downstream 0.5kb downstream 7126 true Chr03: 45119207-45126332 Phaseolus vulgaris
Phvul.003G222200 0.5kb downstream 0.5kb downstream 500 false Chr03: 45119207-45119706 Phaseolus vulgaris
Phvul.003G222200 1.0kb upstream 1.0kb upstream 7626 true Chr03: 45119707-45127332 Phaseolus vulgaris
Phvul.003G222200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 45126333-45127332 Phaseolus vulgaris
Phvul.003G222200 1.0kb downstream 1.0kb downstream 7626 true Chr03: 45118707-45126332 Phaseolus vulgaris
Phvul.003G222200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 45118707-45119706 Phaseolus vulgaris
Phvul.003G222200 2.0kb upstream 2.0kb upstream 8626 true Chr03: 45119707-45128332 Phaseolus vulgaris
Phvul.003G222200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 45126333-45128332 Phaseolus vulgaris
Phvul.003G222200 2.0kb downstream 2.0kb downstream 8626 true Chr03: 45117707-45126332 Phaseolus vulgaris
Phvul.003G222200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 45117707-45119706 Phaseolus vulgaris
Phvul.003G222200 5.0kb upstream 5.0kb upstream 11626 true Chr03: 45119707-45131332 Phaseolus vulgaris
Phvul.003G222200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 45126333-45131332 Phaseolus vulgaris
Phvul.003G222200 5.0kb downstream 5.0kb downstream 11626 true Chr03: 45114707-45126332 Phaseolus vulgaris
Phvul.003G222200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 45114707-45119706 Phaseolus vulgaris
Phvul.003G222200 10.0kb upstream 10.0kb upstream 16626 true Chr03: 45119707-45136332 Phaseolus vulgaris
Phvul.003G222200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 45126333-45136332 Phaseolus vulgaris
Phvul.003G222200 10.0kb downstream 10.0kb downstream 16626 true Chr03: 45109707-45126332 Phaseolus vulgaris
Phvul.003G222200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 45109707-45119706 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308859 5265 Fabidae View MSA
124067362 5270 Rosid View MSA
123753583 5271 Pentapetalae View MSA
122791584 5272 Eudicot View MSA
122043838 5273 Angiosperm View MSA
121310198 5274 Embryophyte View MSA
123347756 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.399 0.0 50.9299    
cufflinks 13.1752 0.0 53.0639    
cufflinks 17.3651 0.0 59.3244   High
cufflinks 17.396 0.0 66.7946   High
cufflinks 16.6757 0.0 58.1849    
cufflinks 13.4669 0.0 48.4505    
cufflinks 14.4905 0.0 51.2645    
cufflinks 17.926 0.0 67.5621   High
cufflinks 14.5116 0.0 51.6471    
cufflinks 11.4985 0.0 42.7813   Low
cufflinks 15.1847 0.0 53.8439    

0 Strain