Gene : Phvul.003G221900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22604:SF123 - BCDNA.GH03377 Genomic Order:  2251
Name:  ? Phvul.003G221900 Secondary Identifier:  ? PAC:37146148
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G221900 0.5kb upstream 0.5kb upstream 3766 true Chr03: 45094040-45097805 Phaseolus vulgaris
Phvul.003G221900 0.5kb upstream 0.5kb upstream 500 false Chr03: 45094040-45094539 Phaseolus vulgaris
Phvul.003G221900 0.5kb downstream 0.5kb downstream 3766 true Chr03: 45094540-45098305 Phaseolus vulgaris
Phvul.003G221900 0.5kb downstream 0.5kb downstream 500 false Chr03: 45097806-45098305 Phaseolus vulgaris
Phvul.003G221900 1.0kb upstream 1.0kb upstream 4266 true Chr03: 45093540-45097805 Phaseolus vulgaris
Phvul.003G221900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 45093540-45094539 Phaseolus vulgaris
Phvul.003G221900 1.0kb downstream 1.0kb downstream 4266 true Chr03: 45094540-45098805 Phaseolus vulgaris
Phvul.003G221900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 45097806-45098805 Phaseolus vulgaris
Phvul.003G221900 2.0kb upstream 2.0kb upstream 5266 true Chr03: 45092540-45097805 Phaseolus vulgaris
Phvul.003G221900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 45092540-45094539 Phaseolus vulgaris
Phvul.003G221900 2.0kb downstream 2.0kb downstream 5266 true Chr03: 45094540-45099805 Phaseolus vulgaris
Phvul.003G221900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 45097806-45099805 Phaseolus vulgaris
Phvul.003G221900 5.0kb upstream 5.0kb upstream 8266 true Chr03: 45089540-45097805 Phaseolus vulgaris
Phvul.003G221900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 45089540-45094539 Phaseolus vulgaris
Phvul.003G221900 5.0kb downstream 5.0kb downstream 8266 true Chr03: 45094540-45102805 Phaseolus vulgaris
Phvul.003G221900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 45097806-45102805 Phaseolus vulgaris
Phvul.003G221900 10.0kb upstream 10.0kb upstream 13266 true Chr03: 45084540-45097805 Phaseolus vulgaris
Phvul.003G221900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 45084540-45094539 Phaseolus vulgaris
Phvul.003G221900 10.0kb downstream 10.0kb downstream 13266 true Chr03: 45094540-45107805 Phaseolus vulgaris
Phvul.003G221900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 45097806-45107805 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040870 5273 Angiosperm View MSA
122308184 5265 Fabidae View MSA
124074719 5270 Rosid View MSA
123740762 5271 Pentapetalae View MSA
122793332 5272 Eudicot View MSA
121344130 5274 Embryophyte View MSA
123379980 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.5479 0.0 40.9622   High
cufflinks 7.54592 0.0 21.0576    
cufflinks 7.14475 0.0 19.9981    
cufflinks 13.8644 0.0 37.1026   High
cufflinks 5.46645 0.0 15.8508    
cufflinks 6.76024 0.0 19.0488    
cufflinks 5.99296 0.0 17.1245    
cufflinks 5.23375 0.0 15.069   Low
cufflinks 5.1538 0.0 15.021   Low
cufflinks 10.9631 0.0 29.6161    
cufflinks 8.29495 0.0 23.0728    

0 Strain