Gene : Phvul.003G222000 P. vulgaris v2.1
Defline:  (1 of 2) K02877 - large subunit ribosomal protein L15e (RP-L15e, RPL15) Genomic Order:  2252
Name:  ? Phvul.003G222000 Secondary Identifier:  ? PAC:37146057
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G222000 0.5kb upstream 0.5kb upstream 2762 true Chr03: 45099184-45101945 Phaseolus vulgaris
Phvul.003G222000 0.5kb upstream 0.5kb upstream 500 false Chr03: 45101446-45101945 Phaseolus vulgaris
Phvul.003G222000 0.5kb downstream 0.5kb downstream 2762 true Chr03: 45098684-45101445 Phaseolus vulgaris
Phvul.003G222000 0.5kb downstream 0.5kb downstream 500 false Chr03: 45098684-45099183 Phaseolus vulgaris
Phvul.003G222000 1.0kb upstream 1.0kb upstream 3262 true Chr03: 45099184-45102445 Phaseolus vulgaris
Phvul.003G222000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 45101446-45102445 Phaseolus vulgaris
Phvul.003G222000 1.0kb downstream 1.0kb downstream 3262 true Chr03: 45098184-45101445 Phaseolus vulgaris
Phvul.003G222000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 45098184-45099183 Phaseolus vulgaris
Phvul.003G222000 2.0kb upstream 2.0kb upstream 4262 true Chr03: 45099184-45103445 Phaseolus vulgaris
Phvul.003G222000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 45101446-45103445 Phaseolus vulgaris
Phvul.003G222000 2.0kb downstream 2.0kb downstream 4262 true Chr03: 45097184-45101445 Phaseolus vulgaris
Phvul.003G222000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 45097184-45099183 Phaseolus vulgaris
Phvul.003G222000 5.0kb upstream 5.0kb upstream 7262 true Chr03: 45099184-45106445 Phaseolus vulgaris
Phvul.003G222000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 45101446-45106445 Phaseolus vulgaris
Phvul.003G222000 5.0kb downstream 5.0kb downstream 7262 true Chr03: 45094184-45101445 Phaseolus vulgaris
Phvul.003G222000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 45094184-45099183 Phaseolus vulgaris
Phvul.003G222000 10.0kb upstream 10.0kb upstream 12262 true Chr03: 45099184-45111445 Phaseolus vulgaris
Phvul.003G222000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 45101446-45111445 Phaseolus vulgaris
Phvul.003G222000 10.0kb downstream 10.0kb downstream 12262 true Chr03: 45089184-45101445 Phaseolus vulgaris
Phvul.003G222000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 45089184-45099183 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307025 5265 Fabidae View MSA
124071184 5270 Rosid View MSA
123741713 5271 Pentapetalae View MSA
122785898 5272 Eudicot View MSA
122047916 5273 Angiosperm View MSA
121345172 5274 Embryophyte View MSA
123424747 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 207.456 0.0 593.719 High  
cufflinks 291.775 0.0 877.467 High High
cufflinks 107.233 0.0 287.063 High Low
cufflinks 307.749 0.0 930.153 High High
cufflinks 229.233 0.0 665.378 High  
cufflinks 105.077 0.0 281.222 High Low
cufflinks 144.502 0.0 400.649 High  
cufflinks 161.35 0.0 451.281 High  
cufflinks 222.644 0.0 648.715 High  
cufflinks 110.065 0.0 295.506 High Low
cufflinks 231.454 0.0 675.11 High  

0 Strain