Gene : Phvul.003G212000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR23322:SF3 - PROTEIN SAY1 Genomic Order:  2142
Name:  ? Phvul.003G212000 Secondary Identifier:  ? PAC:37146461
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G212000 0.5kb upstream 0.5kb upstream 4821 true Chr03: 43832217-43837037 Phaseolus vulgaris
Phvul.003G212000 0.5kb upstream 0.5kb upstream 500 false Chr03: 43832217-43832716 Phaseolus vulgaris
Phvul.003G212000 0.5kb downstream 0.5kb downstream 4821 true Chr03: 43832717-43837537 Phaseolus vulgaris
Phvul.003G212000 0.5kb downstream 0.5kb downstream 500 false Chr03: 43837038-43837537 Phaseolus vulgaris
Phvul.003G212000 1.0kb upstream 1.0kb upstream 5321 true Chr03: 43831717-43837037 Phaseolus vulgaris
Phvul.003G212000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 43831717-43832716 Phaseolus vulgaris
Phvul.003G212000 1.0kb downstream 1.0kb downstream 5321 true Chr03: 43832717-43838037 Phaseolus vulgaris
Phvul.003G212000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 43837038-43838037 Phaseolus vulgaris
Phvul.003G212000 2.0kb upstream 2.0kb upstream 6321 true Chr03: 43830717-43837037 Phaseolus vulgaris
Phvul.003G212000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 43830717-43832716 Phaseolus vulgaris
Phvul.003G212000 2.0kb downstream 2.0kb downstream 6321 true Chr03: 43832717-43839037 Phaseolus vulgaris
Phvul.003G212000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 43837038-43839037 Phaseolus vulgaris
Phvul.003G212000 5.0kb upstream 5.0kb upstream 9321 true Chr03: 43827717-43837037 Phaseolus vulgaris
Phvul.003G212000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 43827717-43832716 Phaseolus vulgaris
Phvul.003G212000 5.0kb downstream 5.0kb downstream 9321 true Chr03: 43832717-43842037 Phaseolus vulgaris
Phvul.003G212000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 43837038-43842037 Phaseolus vulgaris
Phvul.003G212000 10.0kb upstream 10.0kb upstream 14321 true Chr03: 43822717-43837037 Phaseolus vulgaris
Phvul.003G212000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 43822717-43832716 Phaseolus vulgaris
Phvul.003G212000 10.0kb downstream 10.0kb downstream 14321 true Chr03: 43832717-43847037 Phaseolus vulgaris
Phvul.003G212000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 43837038-43847037 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305897 5265 Fabidae View MSA
124064254 5270 Rosid View MSA
123737041 5271 Pentapetalae View MSA
122785711 5272 Eudicot View MSA
122043295 5273 Angiosperm View MSA
121350840 5274 Embryophyte View MSA
123428055 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.0894 0.0 62.4628   High
cufflinks 18.7723 0.0 48.5257    
cufflinks 16.6914 0.0 43.1576    
cufflinks 14.943 0.0 38.7259   Low
cufflinks 16.9587 0.0 43.8742    
cufflinks 14.3133 0.0 37.0819   Low
cufflinks 21.8452 0.0 56.6125    
cufflinks 17.5752 0.0 45.4305    
cufflinks 22.5559 0.0 58.4935    
cufflinks 25.0459 0.0 64.9868   High
cufflinks 19.0701 0.0 49.293    

0 Strain