Gene : Phvul.003G214900 P. vulgaris v2.1
Defline:  (1 of 3) PTHR33593:SF2 - F5O11.5 Genomic Order:  2174
Name:  ? Phvul.003G214900 Secondary Identifier:  ? PAC:37148239
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G214900 0.5kb upstream 0.5kb upstream 1526 true Chr03: 44178795-44180320 Phaseolus vulgaris
Phvul.003G214900 0.5kb upstream 0.5kb upstream 500 false Chr03: 44178795-44179294 Phaseolus vulgaris
Phvul.003G214900 0.5kb downstream 0.5kb downstream 1526 true Chr03: 44179295-44180820 Phaseolus vulgaris
Phvul.003G214900 0.5kb downstream 0.5kb downstream 500 false Chr03: 44180321-44180820 Phaseolus vulgaris
Phvul.003G214900 1.0kb upstream 1.0kb upstream 2026 true Chr03: 44178295-44180320 Phaseolus vulgaris
Phvul.003G214900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 44178295-44179294 Phaseolus vulgaris
Phvul.003G214900 1.0kb downstream 1.0kb downstream 2026 true Chr03: 44179295-44181320 Phaseolus vulgaris
Phvul.003G214900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 44180321-44181320 Phaseolus vulgaris
Phvul.003G214900 2.0kb upstream 2.0kb upstream 3026 true Chr03: 44177295-44180320 Phaseolus vulgaris
Phvul.003G214900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 44177295-44179294 Phaseolus vulgaris
Phvul.003G214900 2.0kb downstream 2.0kb downstream 3026 true Chr03: 44179295-44182320 Phaseolus vulgaris
Phvul.003G214900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 44180321-44182320 Phaseolus vulgaris
Phvul.003G214900 5.0kb upstream 5.0kb upstream 6026 true Chr03: 44174295-44180320 Phaseolus vulgaris
Phvul.003G214900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 44174295-44179294 Phaseolus vulgaris
Phvul.003G214900 5.0kb downstream 5.0kb downstream 6026 true Chr03: 44179295-44185320 Phaseolus vulgaris
Phvul.003G214900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 44180321-44185320 Phaseolus vulgaris
Phvul.003G214900 10.0kb upstream 10.0kb upstream 11026 true Chr03: 44169295-44180320 Phaseolus vulgaris
Phvul.003G214900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 44169295-44179294 Phaseolus vulgaris
Phvul.003G214900 10.0kb downstream 10.0kb downstream 11026 true Chr03: 44179295-44190320 Phaseolus vulgaris
Phvul.003G214900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 44180321-44190320 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041482 5273 Angiosperm View MSA
122310790 5265 Fabidae View MSA
124070642 5270 Rosid View MSA
123743657 5271 Pentapetalae View MSA
122790548 5272 Eudicot View MSA
121348528 5274 Embryophyte View MSA
123380900 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.65795 0.0 26.4439    
cufflinks 3.85835 0.0 11.5729    
cufflinks 1.52367 0.0 5.18143   Low
cufflinks 2.5797 0.0 8.16054    
cufflinks 4.83083 0.0 14.0949    
cufflinks 0.470762 0.0 1.77087 Low Low
cufflinks 24.6969 0.0 63.8629   High
cufflinks 14.6717 0.0 38.8426    
cufflinks 23.2234 0.0 60.1118   High
cufflinks 18.8943 0.0 49.2198    
cufflinks 3.49577 0.0 10.471    

0 Strain