Gene : Phvul.003G205600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR23115//PTHR23115:SF146 - TRANSLATION FACTOR // SUBFAMILY NOT NAMED Genomic Order:  2077
Name:  ? Phvul.003G205600 Secondary Identifier:  ? PAC:37145509
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G205600 0.5kb upstream 0.5kb upstream 2364 true Chr03: 43144650-43147013 Phaseolus vulgaris
Phvul.003G205600 0.5kb upstream 0.5kb upstream 500 false Chr03: 43146514-43147013 Phaseolus vulgaris
Phvul.003G205600 0.5kb downstream 0.5kb downstream 2364 true Chr03: 43144150-43146513 Phaseolus vulgaris
Phvul.003G205600 0.5kb downstream 0.5kb downstream 500 false Chr03: 43144150-43144649 Phaseolus vulgaris
Phvul.003G205600 1.0kb upstream 1.0kb upstream 2864 true Chr03: 43144650-43147513 Phaseolus vulgaris
Phvul.003G205600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 43146514-43147513 Phaseolus vulgaris
Phvul.003G205600 1.0kb downstream 1.0kb downstream 2864 true Chr03: 43143650-43146513 Phaseolus vulgaris
Phvul.003G205600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 43143650-43144649 Phaseolus vulgaris
Phvul.003G205600 2.0kb upstream 2.0kb upstream 3864 true Chr03: 43144650-43148513 Phaseolus vulgaris
Phvul.003G205600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 43146514-43148513 Phaseolus vulgaris
Phvul.003G205600 2.0kb downstream 2.0kb downstream 3864 true Chr03: 43142650-43146513 Phaseolus vulgaris
Phvul.003G205600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 43142650-43144649 Phaseolus vulgaris
Phvul.003G205600 5.0kb upstream 5.0kb upstream 6864 true Chr03: 43144650-43151513 Phaseolus vulgaris
Phvul.003G205600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 43146514-43151513 Phaseolus vulgaris
Phvul.003G205600 5.0kb downstream 5.0kb downstream 6864 true Chr03: 43139650-43146513 Phaseolus vulgaris
Phvul.003G205600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 43139650-43144649 Phaseolus vulgaris
Phvul.003G205600 10.0kb upstream 10.0kb upstream 11864 true Chr03: 43144650-43156513 Phaseolus vulgaris
Phvul.003G205600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 43146514-43156513 Phaseolus vulgaris
Phvul.003G205600 10.0kb downstream 10.0kb downstream 11864 true Chr03: 43134650-43146513 Phaseolus vulgaris
Phvul.003G205600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 43134650-43144649 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307282 5265 Fabidae View MSA
124072746 5270 Rosid View MSA
123742127 5271 Pentapetalae View MSA
122793588 5272 Eudicot View MSA
122044258 5273 Angiosperm View MSA
121344643 5274 Embryophyte View MSA
123380078 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 47.1624 0.0 125.772 High  
cufflinks 134.18 0.0 399.01 High  
cufflinks 362.268 0.0 1302.04 High High
cufflinks 94.3176 0.0 270.376 High  
cufflinks 73.5262 0.0 205.077 High  
cufflinks 368.106 0.0 1332.7 High High
cufflinks 13.7747 0.0 35.8479   Low
cufflinks 17.4086 0.0 45.1056   Low
cufflinks 14.703 0.0 38.1867   Low
cufflinks 77.2512 0.0 214.47 High  
cufflinks 58.3292 0.0 158.394 High  

0 Strain