Gene : Phvul.003G204100 P. vulgaris v2.1
Defline:  (1 of 3) K02900 - large subunit ribosomal protein L27Ae (RP-L27Ae, RPL27A) Genomic Order:  2063
Name:  ? Phvul.003G204100 Secondary Identifier:  ? PAC:37147804
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G204100 0.5kb upstream 0.5kb upstream 1463 true Chr03: 43040631-43042093 Phaseolus vulgaris
Phvul.003G204100 0.5kb upstream 0.5kb upstream 500 false Chr03: 43041594-43042093 Phaseolus vulgaris
Phvul.003G204100 0.5kb downstream 0.5kb downstream 1463 true Chr03: 43040131-43041593 Phaseolus vulgaris
Phvul.003G204100 0.5kb downstream 0.5kb downstream 500 false Chr03: 43040131-43040630 Phaseolus vulgaris
Phvul.003G204100 1.0kb upstream 1.0kb upstream 1963 true Chr03: 43040631-43042593 Phaseolus vulgaris
Phvul.003G204100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 43041594-43042593 Phaseolus vulgaris
Phvul.003G204100 1.0kb downstream 1.0kb downstream 1963 true Chr03: 43039631-43041593 Phaseolus vulgaris
Phvul.003G204100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 43039631-43040630 Phaseolus vulgaris
Phvul.003G204100 2.0kb upstream 2.0kb upstream 2963 true Chr03: 43040631-43043593 Phaseolus vulgaris
Phvul.003G204100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 43041594-43043593 Phaseolus vulgaris
Phvul.003G204100 2.0kb downstream 2.0kb downstream 2963 true Chr03: 43038631-43041593 Phaseolus vulgaris
Phvul.003G204100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 43038631-43040630 Phaseolus vulgaris
Phvul.003G204100 5.0kb upstream 5.0kb upstream 5963 true Chr03: 43040631-43046593 Phaseolus vulgaris
Phvul.003G204100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 43041594-43046593 Phaseolus vulgaris
Phvul.003G204100 5.0kb downstream 5.0kb downstream 5963 true Chr03: 43035631-43041593 Phaseolus vulgaris
Phvul.003G204100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 43035631-43040630 Phaseolus vulgaris
Phvul.003G204100 10.0kb upstream 10.0kb upstream 10963 true Chr03: 43040631-43051593 Phaseolus vulgaris
Phvul.003G204100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 43041594-43051593 Phaseolus vulgaris
Phvul.003G204100 10.0kb downstream 10.0kb downstream 10963 true Chr03: 43030631-43041593 Phaseolus vulgaris
Phvul.003G204100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 43030631-43040630 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313836 5265 Fabidae View MSA
124061356 5270 Rosid View MSA
123746209 5271 Pentapetalae View MSA
122794134 5272 Eudicot View MSA
122049114 5273 Angiosperm View MSA
121346652 5274 Embryophyte View MSA
123426087 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 149.573 0.0 402.373 High  
cufflinks 303.251 0.0 878.469 High High
cufflinks 116.927 0.0 308.415 High Low
cufflinks 292.251 0.0 843.25 High High
cufflinks 279.486 0.0 804.886 High  
cufflinks 118.688 0.0 313.375 High Low
cufflinks 147.489 0.0 397.525 High  
cufflinks 143.435 0.0 385.448 High  
cufflinks 262.608 0.0 748.417 High  
cufflinks 116.716 0.0 308.254 High Low
cufflinks 277.681 0.0 798.677 High  

0 Strain