Gene : Phvul.003G209832 P. vulgaris v2.1
Defline:  (1 of 2) 6.3.4.5 - Argininosuccinate synthase / Citrulline--aspartate ligase Genomic Order:  2120
Name:  ? Phvul.003G209832 Secondary Identifier:  ? PAC:37147241
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris ARGSYNBSUB-PWY Phaseolus vulgaris pathologic  
Pvulgaris ARGSYN-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-4984 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G209832 0.5kb upstream 0.5kb upstream 3219 true Chr03: 43598939-43602157 Phaseolus vulgaris
Phvul.003G209832 0.5kb upstream 0.5kb upstream 500 false Chr03: 43598939-43599438 Phaseolus vulgaris
Phvul.003G209832 0.5kb downstream 0.5kb downstream 3219 true Chr03: 43599439-43602657 Phaseolus vulgaris
Phvul.003G209832 0.5kb downstream 0.5kb downstream 500 false Chr03: 43602158-43602657 Phaseolus vulgaris
Phvul.003G209832 1.0kb upstream 1.0kb upstream 3719 true Chr03: 43598439-43602157 Phaseolus vulgaris
Phvul.003G209832 1.0kb upstream 1.0kb upstream 1000 false Chr03: 43598439-43599438 Phaseolus vulgaris
Phvul.003G209832 1.0kb downstream 1.0kb downstream 3719 true Chr03: 43599439-43603157 Phaseolus vulgaris
Phvul.003G209832 1.0kb downstream 1.0kb downstream 1000 false Chr03: 43602158-43603157 Phaseolus vulgaris
Phvul.003G209832 2.0kb upstream 2.0kb upstream 4719 true Chr03: 43597439-43602157 Phaseolus vulgaris
Phvul.003G209832 2.0kb upstream 2.0kb upstream 2000 false Chr03: 43597439-43599438 Phaseolus vulgaris
Phvul.003G209832 2.0kb downstream 2.0kb downstream 4719 true Chr03: 43599439-43604157 Phaseolus vulgaris
Phvul.003G209832 2.0kb downstream 2.0kb downstream 2000 false Chr03: 43602158-43604157 Phaseolus vulgaris
Phvul.003G209832 5.0kb upstream 5.0kb upstream 7719 true Chr03: 43594439-43602157 Phaseolus vulgaris
Phvul.003G209832 5.0kb upstream 5.0kb upstream 5000 false Chr03: 43594439-43599438 Phaseolus vulgaris
Phvul.003G209832 5.0kb downstream 5.0kb downstream 7719 true Chr03: 43599439-43607157 Phaseolus vulgaris
Phvul.003G209832 5.0kb downstream 5.0kb downstream 5000 false Chr03: 43602158-43607157 Phaseolus vulgaris
Phvul.003G209832 10.0kb upstream 10.0kb upstream 12719 true Chr03: 43589439-43602157 Phaseolus vulgaris
Phvul.003G209832 10.0kb upstream 10.0kb upstream 10000 false Chr03: 43589439-43599438 Phaseolus vulgaris
Phvul.003G209832 10.0kb downstream 10.0kb downstream 12719 true Chr03: 43599439-43612157 Phaseolus vulgaris
Phvul.003G209832 10.0kb downstream 10.0kb downstream 10000 false Chr03: 43602158-43612157 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041429 5273 Angiosperm View MSA
122255383 5265 Fabidae View MSA
124073317 5270 Rosid View MSA
123751861 5271 Pentapetalae View MSA
122792518 5272 Eudicot View MSA
121345676 5274 Embryophyte View MSA
123423772 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.743896 0.0 5.31034   Low
cufflinks 1.36994 0.0 9.80943    
cufflinks 20.3067 0.0 72.4505   High
cufflinks 4.65837 0.0 20.4199    
cufflinks 8.00941 0.0 33.9073    
cufflinks 17.1092 0.0 62.6025   High
cufflinks 1.68455 0.0 11.9525    
cufflinks 3.68428 0.0 20.927    
cufflinks 1.25835 0.0 5.01011    
cufflinks 0.700863 0.0 5.48994   Low
cufflinks 9.31924 0.0 38.1281    

0 Strain