Gene : Phvul.003G209500 P. vulgaris v2.1
Defline:  (1 of 1) K14564 - nucleolar protein 56 (NOP56) Genomic Order:  2116
Name:  ? Phvul.003G209500 Secondary Identifier:  ? PAC:37147204
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G209500 0.5kb upstream 0.5kb upstream 4104 true Chr03: 43541833-43545936 Phaseolus vulgaris
Phvul.003G209500 0.5kb upstream 0.5kb upstream 500 false Chr03: 43545437-43545936 Phaseolus vulgaris
Phvul.003G209500 0.5kb downstream 0.5kb downstream 4104 true Chr03: 43541333-43545436 Phaseolus vulgaris
Phvul.003G209500 0.5kb downstream 0.5kb downstream 500 false Chr03: 43541333-43541832 Phaseolus vulgaris
Phvul.003G209500 1.0kb upstream 1.0kb upstream 4604 true Chr03: 43541833-43546436 Phaseolus vulgaris
Phvul.003G209500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 43545437-43546436 Phaseolus vulgaris
Phvul.003G209500 1.0kb downstream 1.0kb downstream 4604 true Chr03: 43540833-43545436 Phaseolus vulgaris
Phvul.003G209500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 43540833-43541832 Phaseolus vulgaris
Phvul.003G209500 2.0kb upstream 2.0kb upstream 5604 true Chr03: 43541833-43547436 Phaseolus vulgaris
Phvul.003G209500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 43545437-43547436 Phaseolus vulgaris
Phvul.003G209500 2.0kb downstream 2.0kb downstream 5604 true Chr03: 43539833-43545436 Phaseolus vulgaris
Phvul.003G209500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 43539833-43541832 Phaseolus vulgaris
Phvul.003G209500 5.0kb upstream 5.0kb upstream 8604 true Chr03: 43541833-43550436 Phaseolus vulgaris
Phvul.003G209500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 43545437-43550436 Phaseolus vulgaris
Phvul.003G209500 5.0kb downstream 5.0kb downstream 8604 true Chr03: 43536833-43545436 Phaseolus vulgaris
Phvul.003G209500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 43536833-43541832 Phaseolus vulgaris
Phvul.003G209500 10.0kb upstream 10.0kb upstream 13604 true Chr03: 43541833-43555436 Phaseolus vulgaris
Phvul.003G209500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 43545437-43555436 Phaseolus vulgaris
Phvul.003G209500 10.0kb downstream 10.0kb downstream 13604 true Chr03: 43531833-43545436 Phaseolus vulgaris
Phvul.003G209500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 43531833-43541832 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310756 5265 Fabidae View MSA
124068529 5270 Rosid View MSA
123741433 5271 Pentapetalae View MSA
122793119 5272 Eudicot View MSA
122042292 5273 Angiosperm View MSA
121349540 5274 Embryophyte View MSA
123424801 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.9829 0.0 102.395 High  
cufflinks 62.1852 0.0 169.13 High  
cufflinks 26.6055 0.0 68.9045    
cufflinks 15.9384 0.0 41.5093   Low
cufflinks 47.2611 0.0 124.785 High  
cufflinks 25.9619 0.0 67.2003    
cufflinks 54.477 0.0 146.645 High  
cufflinks 60.2104 0.0 164.113 High  
cufflinks 71.4457 0.0 196.894 High High
cufflinks 35.8145 0.0 93.5397 High  
cufflinks 40.3051 0.0 105.72 High  

0 Strain