Gene : Phvul.003G195400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12363//PTHR12363:SF32 - TRANSPORTIN 3 AND IMPORTIN 13 // SUBFAMILY NOT NAMED Genomic Order:  1976
Name:  ? Phvul.003G195400 Secondary Identifier:  ? PAC:37145293
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G195400 0.5kb upstream 0.5kb upstream 16117 true Chr03: 41947616-41963732 Phaseolus vulgaris
Phvul.003G195400 0.5kb upstream 0.5kb upstream 500 false Chr03: 41947616-41948115 Phaseolus vulgaris
Phvul.003G195400 0.5kb downstream 0.5kb downstream 16117 true Chr03: 41948116-41964232 Phaseolus vulgaris
Phvul.003G195400 0.5kb downstream 0.5kb downstream 500 false Chr03: 41963733-41964232 Phaseolus vulgaris
Phvul.003G195400 1.0kb upstream 1.0kb upstream 16617 true Chr03: 41947116-41963732 Phaseolus vulgaris
Phvul.003G195400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 41947116-41948115 Phaseolus vulgaris
Phvul.003G195400 1.0kb downstream 1.0kb downstream 16617 true Chr03: 41948116-41964732 Phaseolus vulgaris
Phvul.003G195400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 41963733-41964732 Phaseolus vulgaris
Phvul.003G195400 2.0kb upstream 2.0kb upstream 17617 true Chr03: 41946116-41963732 Phaseolus vulgaris
Phvul.003G195400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 41946116-41948115 Phaseolus vulgaris
Phvul.003G195400 2.0kb downstream 2.0kb downstream 17617 true Chr03: 41948116-41965732 Phaseolus vulgaris
Phvul.003G195400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 41963733-41965732 Phaseolus vulgaris
Phvul.003G195400 5.0kb upstream 5.0kb upstream 20617 true Chr03: 41943116-41963732 Phaseolus vulgaris
Phvul.003G195400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 41943116-41948115 Phaseolus vulgaris
Phvul.003G195400 5.0kb downstream 5.0kb downstream 20617 true Chr03: 41948116-41968732 Phaseolus vulgaris
Phvul.003G195400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 41963733-41968732 Phaseolus vulgaris
Phvul.003G195400 10.0kb upstream 10.0kb upstream 25617 true Chr03: 41938116-41963732 Phaseolus vulgaris
Phvul.003G195400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 41938116-41948115 Phaseolus vulgaris
Phvul.003G195400 10.0kb downstream 10.0kb downstream 25617 true Chr03: 41948116-41973732 Phaseolus vulgaris
Phvul.003G195400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 41963733-41973732 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299171 5265 Fabidae View MSA
124067010 5270 Rosid View MSA
123737335 5271 Pentapetalae View MSA
122791507 5272 Eudicot View MSA
122047073 5273 Angiosperm View MSA
121346085 5274 Embryophyte View MSA
123427248 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.27957 0.0 29.7444    
cufflinks 10.4503 0.0 29.4305    
cufflinks 8.37277 0.0 23.8964    
cufflinks 7.82368 0.0 28.4798    
cufflinks 13.3015 0.0 37.0951    
cufflinks 6.66142 0.0 19.596   Low
cufflinks 11.8697 0.0 42.9026    
cufflinks 12.7313 0.0 44.1685    
cufflinks 15.8664 0.0 44.4181   High
cufflinks 18.6786 0.0 67.0742   High
cufflinks 8.642 0.0 31.5487    

0 Strain