Gene : Phvul.003G196100 P. vulgaris v2.1
Defline:  (1 of 13) PF02985 - HEAT repeat (HEAT) Genomic Order:  1983
Name:  ? Phvul.003G196100 Secondary Identifier:  ? PAC:37146082
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G196100 0.5kb upstream 0.5kb upstream 3926 true Chr03: 42031134-42035059 Phaseolus vulgaris
Phvul.003G196100 0.5kb upstream 0.5kb upstream 500 false Chr03: 42034560-42035059 Phaseolus vulgaris
Phvul.003G196100 0.5kb downstream 0.5kb downstream 3926 true Chr03: 42030634-42034559 Phaseolus vulgaris
Phvul.003G196100 0.5kb downstream 0.5kb downstream 500 false Chr03: 42030634-42031133 Phaseolus vulgaris
Phvul.003G196100 1.0kb upstream 1.0kb upstream 4426 true Chr03: 42031134-42035559 Phaseolus vulgaris
Phvul.003G196100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 42034560-42035559 Phaseolus vulgaris
Phvul.003G196100 1.0kb downstream 1.0kb downstream 4426 true Chr03: 42030134-42034559 Phaseolus vulgaris
Phvul.003G196100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 42030134-42031133 Phaseolus vulgaris
Phvul.003G196100 2.0kb upstream 2.0kb upstream 5426 true Chr03: 42031134-42036559 Phaseolus vulgaris
Phvul.003G196100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 42034560-42036559 Phaseolus vulgaris
Phvul.003G196100 2.0kb downstream 2.0kb downstream 5426 true Chr03: 42029134-42034559 Phaseolus vulgaris
Phvul.003G196100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 42029134-42031133 Phaseolus vulgaris
Phvul.003G196100 5.0kb upstream 5.0kb upstream 8426 true Chr03: 42031134-42039559 Phaseolus vulgaris
Phvul.003G196100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 42034560-42039559 Phaseolus vulgaris
Phvul.003G196100 5.0kb downstream 5.0kb downstream 8426 true Chr03: 42026134-42034559 Phaseolus vulgaris
Phvul.003G196100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 42026134-42031133 Phaseolus vulgaris
Phvul.003G196100 10.0kb upstream 10.0kb upstream 13426 true Chr03: 42031134-42044559 Phaseolus vulgaris
Phvul.003G196100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 42034560-42044559 Phaseolus vulgaris
Phvul.003G196100 10.0kb downstream 10.0kb downstream 13426 true Chr03: 42021134-42034559 Phaseolus vulgaris
Phvul.003G196100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 42021134-42031133 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041018 5273 Angiosperm View MSA
122311359 5265 Fabidae View MSA
124069706 5270 Rosid View MSA
123745990 5271 Pentapetalae View MSA
122793911 5272 Eudicot View MSA
121309785 5274 Embryophyte View MSA
123426800 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.78375 0.0 8.02007    
cufflinks 6.26504 0.0 16.7696    
cufflinks 4.35551 0.0 12.0713    
cufflinks 1.75698 0.0 5.30846   Low
cufflinks 18.7273 0.0 48.4985   High
cufflinks 8.85162 0.0 23.1808    
cufflinks 11.1668 0.0 28.9426    
cufflinks 6.67819 0.0 17.7756    
cufflinks 12.6611 0.0 32.7519    
cufflinks 2.02174 0.0 6.01825   Low
cufflinks 32.2563 0.0 85.8558   High

0 Strain