Gene : Phvul.003G197800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11119:SF48 - NUCLEOBASE-ASCORBATE TRANSPORTER 5-RELATED Genomic Order:  2000
Name:  ? Phvul.003G197800 Secondary Identifier:  ? PAC:37147322
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G197800 0.5kb upstream 0.5kb upstream 6943 true Chr03: 42221364-42228306 Phaseolus vulgaris
Phvul.003G197800 0.5kb upstream 0.5kb upstream 500 false Chr03: 42227807-42228306 Phaseolus vulgaris
Phvul.003G197800 0.5kb downstream 0.5kb downstream 6943 true Chr03: 42220864-42227806 Phaseolus vulgaris
Phvul.003G197800 0.5kb downstream 0.5kb downstream 500 false Chr03: 42220864-42221363 Phaseolus vulgaris
Phvul.003G197800 1.0kb upstream 1.0kb upstream 7443 true Chr03: 42221364-42228806 Phaseolus vulgaris
Phvul.003G197800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 42227807-42228806 Phaseolus vulgaris
Phvul.003G197800 1.0kb downstream 1.0kb downstream 7443 true Chr03: 42220364-42227806 Phaseolus vulgaris
Phvul.003G197800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 42220364-42221363 Phaseolus vulgaris
Phvul.003G197800 2.0kb upstream 2.0kb upstream 8443 true Chr03: 42221364-42229806 Phaseolus vulgaris
Phvul.003G197800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 42227807-42229806 Phaseolus vulgaris
Phvul.003G197800 2.0kb downstream 2.0kb downstream 8443 true Chr03: 42219364-42227806 Phaseolus vulgaris
Phvul.003G197800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 42219364-42221363 Phaseolus vulgaris
Phvul.003G197800 5.0kb upstream 5.0kb upstream 11443 true Chr03: 42221364-42232806 Phaseolus vulgaris
Phvul.003G197800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 42227807-42232806 Phaseolus vulgaris
Phvul.003G197800 5.0kb downstream 5.0kb downstream 11443 true Chr03: 42216364-42227806 Phaseolus vulgaris
Phvul.003G197800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 42216364-42221363 Phaseolus vulgaris
Phvul.003G197800 10.0kb upstream 10.0kb upstream 16443 true Chr03: 42221364-42237806 Phaseolus vulgaris
Phvul.003G197800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 42227807-42237806 Phaseolus vulgaris
Phvul.003G197800 10.0kb downstream 10.0kb downstream 16443 true Chr03: 42211364-42227806 Phaseolus vulgaris
Phvul.003G197800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 42211364-42221363 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297613 5265 Fabidae View MSA
124067903 5270 Rosid View MSA
123745351 5271 Pentapetalae View MSA
122794781 5272 Eudicot View MSA
122049429 5273 Angiosperm View MSA
121311395 5274 Embryophyte View MSA
123428829 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.8293 0.0 64.2482    
cufflinks 23.3254 0.0 60.3109    
cufflinks 12.8034 0.0 33.4417   Low
cufflinks 50.3377 0.0 134.021 High  
cufflinks 31.985 0.0 83.2141    
cufflinks 23.7558 0.0 61.4359    
cufflinks 62.3291 0.0 169.67 High High
cufflinks 69.7273 0.0 192.909 High High
cufflinks 37.2464 0.0 97.3985 High  
cufflinks 31.1359 0.0 80.9929    
cufflinks 38.8408 0.0 101.852 High  

0 Strain