Gene : Phvul.003G197900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR24072:SF149 - RAC-LIKE GTP-BINDING PROTEIN ARAC10-RELATED Genomic Order:  2001
Name:  ? Phvul.003G197900 Secondary Identifier:  ? PAC:37144875
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G197900 0.5kb upstream 0.5kb upstream 4525 true Chr03: 42240458-42244982 Phaseolus vulgaris
Phvul.003G197900 0.5kb upstream 0.5kb upstream 500 false Chr03: 42244483-42244982 Phaseolus vulgaris
Phvul.003G197900 0.5kb downstream 0.5kb downstream 4525 true Chr03: 42239958-42244482 Phaseolus vulgaris
Phvul.003G197900 0.5kb downstream 0.5kb downstream 500 false Chr03: 42239958-42240457 Phaseolus vulgaris
Phvul.003G197900 1.0kb upstream 1.0kb upstream 5025 true Chr03: 42240458-42245482 Phaseolus vulgaris
Phvul.003G197900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 42244483-42245482 Phaseolus vulgaris
Phvul.003G197900 1.0kb downstream 1.0kb downstream 5025 true Chr03: 42239458-42244482 Phaseolus vulgaris
Phvul.003G197900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 42239458-42240457 Phaseolus vulgaris
Phvul.003G197900 2.0kb upstream 2.0kb upstream 6025 true Chr03: 42240458-42246482 Phaseolus vulgaris
Phvul.003G197900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 42244483-42246482 Phaseolus vulgaris
Phvul.003G197900 2.0kb downstream 2.0kb downstream 6025 true Chr03: 42238458-42244482 Phaseolus vulgaris
Phvul.003G197900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 42238458-42240457 Phaseolus vulgaris
Phvul.003G197900 5.0kb upstream 5.0kb upstream 9025 true Chr03: 42240458-42249482 Phaseolus vulgaris
Phvul.003G197900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 42244483-42249482 Phaseolus vulgaris
Phvul.003G197900 5.0kb downstream 5.0kb downstream 9025 true Chr03: 42235458-42244482 Phaseolus vulgaris
Phvul.003G197900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 42235458-42240457 Phaseolus vulgaris
Phvul.003G197900 10.0kb upstream 10.0kb upstream 14025 true Chr03: 42240458-42254482 Phaseolus vulgaris
Phvul.003G197900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 42244483-42254482 Phaseolus vulgaris
Phvul.003G197900 10.0kb downstream 10.0kb downstream 14025 true Chr03: 42230458-42244482 Phaseolus vulgaris
Phvul.003G197900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 42230458-42240457 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314687 5265 Fabidae View MSA
124065209 5270 Rosid View MSA
123743174 5271 Pentapetalae View MSA
122789530 5272 Eudicot View MSA
122043872 5273 Angiosperm View MSA
121310204 5274 Embryophyte View MSA
123426845 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.887351 0.0 3.93266    
cufflinks 1.56469 0.0 6.38903    
cufflinks 3.89373 0.0 16.8873    
cufflinks 3.65907 0.0 12.3998    
cufflinks 3.45836 0.0 11.888    
cufflinks 5.29478 0.0 22.182    
cufflinks 1.3513 0.0 5.84913    
cufflinks 0.580561 0.0 4.11171    
cufflinks 0.943112 0.0 4.16932    
cufflinks 0.0928668 0.0 0.425327 Low Low
cufflinks 7.20869 0.0 25.5467   High

0 Strain