Gene : Phvul.003G200600 P. vulgaris v2.1
Defline:  (1 of 41) PF02701 - Dof domain, zinc finger (zf-Dof) Genomic Order:  2028
Name:  ? Phvul.003G200600 Secondary Identifier:  ? PAC:37145192
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G200600 0.5kb upstream 0.5kb upstream 2775 true Chr03: 42569438-42572212 Phaseolus vulgaris
Phvul.003G200600 0.5kb upstream 0.5kb upstream 500 false Chr03: 42569438-42569937 Phaseolus vulgaris
Phvul.003G200600 0.5kb downstream 0.5kb downstream 2775 true Chr03: 42569938-42572712 Phaseolus vulgaris
Phvul.003G200600 0.5kb downstream 0.5kb downstream 500 false Chr03: 42572213-42572712 Phaseolus vulgaris
Phvul.003G200600 1.0kb upstream 1.0kb upstream 3275 true Chr03: 42568938-42572212 Phaseolus vulgaris
Phvul.003G200600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 42568938-42569937 Phaseolus vulgaris
Phvul.003G200600 1.0kb downstream 1.0kb downstream 3275 true Chr03: 42569938-42573212 Phaseolus vulgaris
Phvul.003G200600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 42572213-42573212 Phaseolus vulgaris
Phvul.003G200600 2.0kb upstream 2.0kb upstream 4275 true Chr03: 42567938-42572212 Phaseolus vulgaris
Phvul.003G200600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 42567938-42569937 Phaseolus vulgaris
Phvul.003G200600 2.0kb downstream 2.0kb downstream 4275 true Chr03: 42569938-42574212 Phaseolus vulgaris
Phvul.003G200600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 42572213-42574212 Phaseolus vulgaris
Phvul.003G200600 5.0kb upstream 5.0kb upstream 7275 true Chr03: 42564938-42572212 Phaseolus vulgaris
Phvul.003G200600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 42564938-42569937 Phaseolus vulgaris
Phvul.003G200600 5.0kb downstream 5.0kb downstream 7275 true Chr03: 42569938-42577212 Phaseolus vulgaris
Phvul.003G200600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 42572213-42577212 Phaseolus vulgaris
Phvul.003G200600 10.0kb upstream 10.0kb upstream 12275 true Chr03: 42559938-42572212 Phaseolus vulgaris
Phvul.003G200600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 42559938-42569937 Phaseolus vulgaris
Phvul.003G200600 10.0kb downstream 10.0kb downstream 12275 true Chr03: 42569938-42582212 Phaseolus vulgaris
Phvul.003G200600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 42572213-42582212 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253871 5265 Fabidae View MSA
124068881 5270 Rosid View MSA
123743079 5271 Pentapetalae View MSA
122797723 5272 Eudicot View MSA
122049615 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.400877 0.0 1.51143 Low Low
cufflinks 3.66934 0.0 10.9859    
cufflinks 2.65914 0.0 8.24261    
cufflinks 1.73436 0.0 5.69206    
cufflinks 3.01987 0.0 9.3218    
cufflinks 9.14863 0.0 24.9666   High
cufflinks 3.85891 0.0 11.487    
cufflinks 1.40479 0.0 4.67037    
cufflinks 3.76081 0.0 11.2592    
cufflinks 0.0429692 0.0 0.197051 Low Low
cufflinks 3.39716 0.0 10.3305    

0 Strain