Gene : Phvul.003G200700 P. vulgaris v2.1
Defline:  (1 of 3) 2.7.1.33 - Pantothenate kinase / Pantothenic acid kinase Genomic Order:  2029
Name:  ? Phvul.003G200700 Secondary Identifier:  ? PAC:37145435
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PANTO-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G200700 0.5kb upstream 0.5kb upstream 15681 true Chr03: 42574368-42590048 Phaseolus vulgaris
Phvul.003G200700 0.5kb upstream 0.5kb upstream 500 false Chr03: 42589549-42590048 Phaseolus vulgaris
Phvul.003G200700 0.5kb downstream 0.5kb downstream 15681 true Chr03: 42573868-42589548 Phaseolus vulgaris
Phvul.003G200700 0.5kb downstream 0.5kb downstream 500 false Chr03: 42573868-42574367 Phaseolus vulgaris
Phvul.003G200700 1.0kb upstream 1.0kb upstream 16181 true Chr03: 42574368-42590548 Phaseolus vulgaris
Phvul.003G200700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 42589549-42590548 Phaseolus vulgaris
Phvul.003G200700 1.0kb downstream 1.0kb downstream 16181 true Chr03: 42573368-42589548 Phaseolus vulgaris
Phvul.003G200700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 42573368-42574367 Phaseolus vulgaris
Phvul.003G200700 2.0kb upstream 2.0kb upstream 17181 true Chr03: 42574368-42591548 Phaseolus vulgaris
Phvul.003G200700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 42589549-42591548 Phaseolus vulgaris
Phvul.003G200700 2.0kb downstream 2.0kb downstream 17181 true Chr03: 42572368-42589548 Phaseolus vulgaris
Phvul.003G200700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 42572368-42574367 Phaseolus vulgaris
Phvul.003G200700 5.0kb upstream 5.0kb upstream 20181 true Chr03: 42574368-42594548 Phaseolus vulgaris
Phvul.003G200700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 42589549-42594548 Phaseolus vulgaris
Phvul.003G200700 5.0kb downstream 5.0kb downstream 20181 true Chr03: 42569368-42589548 Phaseolus vulgaris
Phvul.003G200700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 42569368-42574367 Phaseolus vulgaris
Phvul.003G200700 10.0kb upstream 10.0kb upstream 25181 true Chr03: 42574368-42599548 Phaseolus vulgaris
Phvul.003G200700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 42589549-42599548 Phaseolus vulgaris
Phvul.003G200700 10.0kb downstream 10.0kb downstream 25181 true Chr03: 42564368-42589548 Phaseolus vulgaris
Phvul.003G200700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 42564368-42574367 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121618041 5273 Angiosperm View MSA
122254800 5265 Fabidae View MSA
123996805 5270 Rosid View MSA
123571213 5271 Pentapetalae View MSA
122605941 5272 Eudicot View MSA
121351154 5274 Embryophyte View MSA
123423808 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.93993 0.0 13.2378   Low
cufflinks 8.20125 0.0 21.3513    
cufflinks 8.2884 0.0 21.5516    
cufflinks 7.43642 0.0 19.5567    
cufflinks 7.17006 0.0 18.8369    
cufflinks 9.58763 0.0 24.843    
cufflinks 12.3726 0.0 31.9808   High
cufflinks 11.1201 0.0 28.7474    
cufflinks 14.0391 0.0 36.3019   High
cufflinks 10.0076 0.0 25.9154    
cufflinks 9.27303 0.0 24.0833    

0 Strain