Gene : Phvul.003G201000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10093 - IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG Genomic Order:  2032
Name:  ? Phvul.003G201000 Secondary Identifier:  ? PAC:37144827
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G201000 0.5kb upstream 0.5kb upstream 2758 true Chr03: 42610853-42613610 Phaseolus vulgaris
Phvul.003G201000 0.5kb upstream 0.5kb upstream 500 false Chr03: 42613111-42613610 Phaseolus vulgaris
Phvul.003G201000 0.5kb downstream 0.5kb downstream 2758 true Chr03: 42610353-42613110 Phaseolus vulgaris
Phvul.003G201000 0.5kb downstream 0.5kb downstream 500 false Chr03: 42610353-42610852 Phaseolus vulgaris
Phvul.003G201000 1.0kb upstream 1.0kb upstream 3258 true Chr03: 42610853-42614110 Phaseolus vulgaris
Phvul.003G201000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 42613111-42614110 Phaseolus vulgaris
Phvul.003G201000 1.0kb downstream 1.0kb downstream 3258 true Chr03: 42609853-42613110 Phaseolus vulgaris
Phvul.003G201000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 42609853-42610852 Phaseolus vulgaris
Phvul.003G201000 2.0kb upstream 2.0kb upstream 4258 true Chr03: 42610853-42615110 Phaseolus vulgaris
Phvul.003G201000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 42613111-42615110 Phaseolus vulgaris
Phvul.003G201000 2.0kb downstream 2.0kb downstream 4258 true Chr03: 42608853-42613110 Phaseolus vulgaris
Phvul.003G201000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 42608853-42610852 Phaseolus vulgaris
Phvul.003G201000 5.0kb upstream 5.0kb upstream 7258 true Chr03: 42610853-42618110 Phaseolus vulgaris
Phvul.003G201000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 42613111-42618110 Phaseolus vulgaris
Phvul.003G201000 5.0kb downstream 5.0kb downstream 7258 true Chr03: 42605853-42613110 Phaseolus vulgaris
Phvul.003G201000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 42605853-42610852 Phaseolus vulgaris
Phvul.003G201000 10.0kb upstream 10.0kb upstream 12258 true Chr03: 42610853-42623110 Phaseolus vulgaris
Phvul.003G201000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 42613111-42623110 Phaseolus vulgaris
Phvul.003G201000 10.0kb downstream 10.0kb downstream 12258 true Chr03: 42600853-42613110 Phaseolus vulgaris
Phvul.003G201000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 42600853-42610852 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026522 5273 Angiosperm View MSA
122314473 5265 Fabidae View MSA
124069204 5270 Rosid View MSA
123746526 5271 Pentapetalae View MSA
122790333 5272 Eudicot View MSA
121348454 5274 Embryophyte View MSA
123428131 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.1429 0.0 93.6413 High  
cufflinks 28.5194 0.0 74.4731    
cufflinks 18.4917 0.0 49.8698    
cufflinks 55.0825 0.0 142.535 High High
cufflinks 25.2068 0.0 66.3839    
cufflinks 10.8429 0.0 30.5187   Low
cufflinks 15.0074 0.0 40.8763    
cufflinks 13.0067 0.0 35.93   Low
cufflinks 17.7764 0.0 47.7315    
cufflinks 46.4902 0.0 120.174 High High
cufflinks 27.8803 0.0 72.8636    

0 Strain