Gene : Phvul.003G199400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23257:SF512 - PROTEIN KINASE Genomic Order:  2016
Name:  ? Phvul.003G199400 Secondary Identifier:  ? PAC:37147216
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G199400 0.5kb upstream 0.5kb upstream 4711 true Chr03: 42390098-42394808 Phaseolus vulgaris
Phvul.003G199400 0.5kb upstream 0.5kb upstream 500 false Chr03: 42394309-42394808 Phaseolus vulgaris
Phvul.003G199400 0.5kb downstream 0.5kb downstream 4711 true Chr03: 42389598-42394308 Phaseolus vulgaris
Phvul.003G199400 0.5kb downstream 0.5kb downstream 500 false Chr03: 42389598-42390097 Phaseolus vulgaris
Phvul.003G199400 1.0kb upstream 1.0kb upstream 5211 true Chr03: 42390098-42395308 Phaseolus vulgaris
Phvul.003G199400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 42394309-42395308 Phaseolus vulgaris
Phvul.003G199400 1.0kb downstream 1.0kb downstream 5211 true Chr03: 42389098-42394308 Phaseolus vulgaris
Phvul.003G199400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 42389098-42390097 Phaseolus vulgaris
Phvul.003G199400 2.0kb upstream 2.0kb upstream 6211 true Chr03: 42390098-42396308 Phaseolus vulgaris
Phvul.003G199400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 42394309-42396308 Phaseolus vulgaris
Phvul.003G199400 2.0kb downstream 2.0kb downstream 6211 true Chr03: 42388098-42394308 Phaseolus vulgaris
Phvul.003G199400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 42388098-42390097 Phaseolus vulgaris
Phvul.003G199400 5.0kb upstream 5.0kb upstream 9211 true Chr03: 42390098-42399308 Phaseolus vulgaris
Phvul.003G199400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 42394309-42399308 Phaseolus vulgaris
Phvul.003G199400 5.0kb downstream 5.0kb downstream 9211 true Chr03: 42385098-42394308 Phaseolus vulgaris
Phvul.003G199400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 42385098-42390097 Phaseolus vulgaris
Phvul.003G199400 10.0kb upstream 10.0kb upstream 14211 true Chr03: 42390098-42404308 Phaseolus vulgaris
Phvul.003G199400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 42394309-42404308 Phaseolus vulgaris
Phvul.003G199400 10.0kb downstream 10.0kb downstream 14211 true Chr03: 42380098-42394308 Phaseolus vulgaris
Phvul.003G199400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 42380098-42390097 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303399 5265 Fabidae View MSA
124069596 5270 Rosid View MSA
123751739 5271 Pentapetalae View MSA
122795785 5272 Eudicot View MSA
122041918 5273 Angiosperm View MSA
121348422 5274 Embryophyte View MSA
123380860 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 59.3414 0.0 159.442 High  
cufflinks 33.4414 0.0 86.9129 High  
cufflinks 58.5998 0.0 157.717 High  
cufflinks 80.3613 0.0 220.43 High High
cufflinks 46.9267 0.0 123.328 High  
cufflinks 28.2649 0.0 73.1755   Low
cufflinks 33.0829 0.0 85.9938 High  
cufflinks 23.6791 0.0 61.2096   Low
cufflinks 45.9075 0.0 121.185 High  
cufflinks 62.8206 0.0 169.251 High  
cufflinks 44.4687 0.0 116.761 High  

0 Strain