Gene : Phvul.003G188100 P. vulgaris v2.1
Genomic Order:  1903 Name:  ? Phvul.003G188100
Secondary Identifier:  ? PAC:37147007
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G188100 0.5kb upstream 0.5kb upstream 2320 true Chr03: 41193814-41196133 Phaseolus vulgaris
Phvul.003G188100 0.5kb upstream 0.5kb upstream 500 false Chr03: 41193814-41194313 Phaseolus vulgaris
Phvul.003G188100 0.5kb downstream 0.5kb downstream 2320 true Chr03: 41194314-41196633 Phaseolus vulgaris
Phvul.003G188100 0.5kb downstream 0.5kb downstream 500 false Chr03: 41196134-41196633 Phaseolus vulgaris
Phvul.003G188100 1.0kb upstream 1.0kb upstream 2820 true Chr03: 41193314-41196133 Phaseolus vulgaris
Phvul.003G188100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 41193314-41194313 Phaseolus vulgaris
Phvul.003G188100 1.0kb downstream 1.0kb downstream 2820 true Chr03: 41194314-41197133 Phaseolus vulgaris
Phvul.003G188100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 41196134-41197133 Phaseolus vulgaris
Phvul.003G188100 2.0kb upstream 2.0kb upstream 3820 true Chr03: 41192314-41196133 Phaseolus vulgaris
Phvul.003G188100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 41192314-41194313 Phaseolus vulgaris
Phvul.003G188100 2.0kb downstream 2.0kb downstream 3820 true Chr03: 41194314-41198133 Phaseolus vulgaris
Phvul.003G188100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 41196134-41198133 Phaseolus vulgaris
Phvul.003G188100 5.0kb upstream 5.0kb upstream 6820 true Chr03: 41189314-41196133 Phaseolus vulgaris
Phvul.003G188100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 41189314-41194313 Phaseolus vulgaris
Phvul.003G188100 5.0kb downstream 5.0kb downstream 6820 true Chr03: 41194314-41201133 Phaseolus vulgaris
Phvul.003G188100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 41196134-41201133 Phaseolus vulgaris
Phvul.003G188100 10.0kb upstream 10.0kb upstream 11820 true Chr03: 41184314-41196133 Phaseolus vulgaris
Phvul.003G188100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 41184314-41194313 Phaseolus vulgaris
Phvul.003G188100 10.0kb downstream 10.0kb downstream 11820 true Chr03: 41194314-41206133 Phaseolus vulgaris
Phvul.003G188100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 41196134-41206133 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312944 5265 Fabidae View MSA
124071450 5270 Rosid View MSA
123741971 5271 Pentapetalae View MSA
122796255 5272 Eudicot View MSA
122050366 5273 Angiosperm View MSA
121311873 5274 Embryophyte View MSA
123349108 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.30753 0.0 23.4088    
cufflinks 4.25454 0.0 23.896   High
cufflinks 3.64465 0.0 21.507    
cufflinks 3.71003 0.0 17.6404    
cufflinks 2.37303 0.0 12.915   Low
cufflinks 3.83269 0.0 18.8461    
cufflinks 3.18102 0.0 19.011    
cufflinks 4.02824 0.0 23.2786    
cufflinks 3.73353 0.0 17.5623    
cufflinks 2.407 0.0 13.4434   Low
cufflinks 3.43012 0.0 16.6797    

0 Strain