Gene : Phvul.003G188901 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31889:SF2 - FUCOSYLTRANSFERASE 2-RELATED Genomic Order:  1911
Name:  ? Phvul.003G188901 Secondary Identifier:  ? PAC:37147292
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G188901 0.5kb upstream 0.5kb upstream 2654 true Chr03: 41239804-41242457 Phaseolus vulgaris
Phvul.003G188901 0.5kb upstream 0.5kb upstream 500 false Chr03: 41239804-41240303 Phaseolus vulgaris
Phvul.003G188901 0.5kb downstream 0.5kb downstream 2654 true Chr03: 41240304-41242957 Phaseolus vulgaris
Phvul.003G188901 0.5kb downstream 0.5kb downstream 500 false Chr03: 41242458-41242957 Phaseolus vulgaris
Phvul.003G188901 1.0kb upstream 1.0kb upstream 3154 true Chr03: 41239304-41242457 Phaseolus vulgaris
Phvul.003G188901 1.0kb upstream 1.0kb upstream 1000 false Chr03: 41239304-41240303 Phaseolus vulgaris
Phvul.003G188901 1.0kb downstream 1.0kb downstream 3154 true Chr03: 41240304-41243457 Phaseolus vulgaris
Phvul.003G188901 1.0kb downstream 1.0kb downstream 1000 false Chr03: 41242458-41243457 Phaseolus vulgaris
Phvul.003G188901 2.0kb upstream 2.0kb upstream 4154 true Chr03: 41238304-41242457 Phaseolus vulgaris
Phvul.003G188901 2.0kb upstream 2.0kb upstream 2000 false Chr03: 41238304-41240303 Phaseolus vulgaris
Phvul.003G188901 2.0kb downstream 2.0kb downstream 4154 true Chr03: 41240304-41244457 Phaseolus vulgaris
Phvul.003G188901 2.0kb downstream 2.0kb downstream 2000 false Chr03: 41242458-41244457 Phaseolus vulgaris
Phvul.003G188901 5.0kb upstream 5.0kb upstream 7154 true Chr03: 41235304-41242457 Phaseolus vulgaris
Phvul.003G188901 5.0kb upstream 5.0kb upstream 5000 false Chr03: 41235304-41240303 Phaseolus vulgaris
Phvul.003G188901 5.0kb downstream 5.0kb downstream 7154 true Chr03: 41240304-41247457 Phaseolus vulgaris
Phvul.003G188901 5.0kb downstream 5.0kb downstream 5000 false Chr03: 41242458-41247457 Phaseolus vulgaris
Phvul.003G188901 10.0kb upstream 10.0kb upstream 12154 true Chr03: 41230304-41242457 Phaseolus vulgaris
Phvul.003G188901 10.0kb upstream 10.0kb upstream 10000 false Chr03: 41230304-41240303 Phaseolus vulgaris
Phvul.003G188901 10.0kb downstream 10.0kb downstream 12154 true Chr03: 41240304-41252457 Phaseolus vulgaris
Phvul.003G188901 10.0kb downstream 10.0kb downstream 10000 false Chr03: 41242458-41252457 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307646 5265 Fabidae View MSA
124069231 5270 Rosid View MSA
123743529 5271 Pentapetalae View MSA
122787237 5272 Eudicot View MSA
122051157 5273 Angiosperm View MSA
121351526 5274 Embryophyte View MSA
123427849 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.61335 0.0 5.32208   Low
cufflinks 8.46894 0.0 23.3928   High
cufflinks 5.33214 0.0 15.3119    
cufflinks 9.33447 0.0 25.6478   High
cufflinks 5.34054 0.0 15.4516    
cufflinks 8.90407 0.0 24.4811   High
cufflinks 3.24619 0.0 9.91736    
cufflinks 3.80331 0.0 11.3496    
cufflinks 3.55252 0.0 10.7763    
cufflinks 3.77091 0.0 11.31    
cufflinks 6.78444 0.0 19.2    

0 Strain