Gene : Phvul.003G192200 P. vulgaris v2.1
Genomic Order:  1944 Name:  ? Phvul.003G192200
Secondary Identifier:  ? PAC:37146257
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G192200 0.5kb upstream 0.5kb upstream 3815 true Chr03: 41620441-41624255 Phaseolus vulgaris
Phvul.003G192200 0.5kb upstream 0.5kb upstream 500 false Chr03: 41620441-41620940 Phaseolus vulgaris
Phvul.003G192200 0.5kb downstream 0.5kb downstream 3815 true Chr03: 41620941-41624755 Phaseolus vulgaris
Phvul.003G192200 0.5kb downstream 0.5kb downstream 500 false Chr03: 41624256-41624755 Phaseolus vulgaris
Phvul.003G192200 1.0kb upstream 1.0kb upstream 4315 true Chr03: 41619941-41624255 Phaseolus vulgaris
Phvul.003G192200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 41619941-41620940 Phaseolus vulgaris
Phvul.003G192200 1.0kb downstream 1.0kb downstream 4315 true Chr03: 41620941-41625255 Phaseolus vulgaris
Phvul.003G192200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 41624256-41625255 Phaseolus vulgaris
Phvul.003G192200 2.0kb upstream 2.0kb upstream 5315 true Chr03: 41618941-41624255 Phaseolus vulgaris
Phvul.003G192200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 41618941-41620940 Phaseolus vulgaris
Phvul.003G192200 2.0kb downstream 2.0kb downstream 5315 true Chr03: 41620941-41626255 Phaseolus vulgaris
Phvul.003G192200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 41624256-41626255 Phaseolus vulgaris
Phvul.003G192200 5.0kb upstream 5.0kb upstream 8315 true Chr03: 41615941-41624255 Phaseolus vulgaris
Phvul.003G192200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 41615941-41620940 Phaseolus vulgaris
Phvul.003G192200 5.0kb downstream 5.0kb downstream 8315 true Chr03: 41620941-41629255 Phaseolus vulgaris
Phvul.003G192200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 41624256-41629255 Phaseolus vulgaris
Phvul.003G192200 10.0kb upstream 10.0kb upstream 13315 true Chr03: 41610941-41624255 Phaseolus vulgaris
Phvul.003G192200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 41610941-41620940 Phaseolus vulgaris
Phvul.003G192200 10.0kb downstream 10.0kb downstream 13315 true Chr03: 41620941-41634255 Phaseolus vulgaris
Phvul.003G192200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 41624256-41634255 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305906 5265 Fabidae View MSA
124060482 5270 Rosid View MSA
123739392 5271 Pentapetalae View MSA
122790873 5272 Eudicot View MSA
122045595 5273 Angiosperm View MSA
121345688 5274 Embryophyte View MSA
123425911 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.6375 0.0 33.3412    
cufflinks 9.24171 0.0 35.758    
cufflinks 6.05576 0.0 21.143    
cufflinks 14.0068 0.0 50.6745   High
cufflinks 7.61811 0.0 31.2495    
cufflinks 6.04698 0.0 21.1221    
cufflinks 6.91018 0.0 28.7571    
cufflinks 8.1386 0.0 32.7586    
cufflinks 11.8381 0.0 43.8821   High
cufflinks 6.592 0.0 22.6417    
cufflinks 5.91346 0.0 25.9828   Low

0 Strain