Gene : Phvul.003G192700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10264:SF92 - HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 1 Genomic Order:  1949
Name:  ? Phvul.003G192700 Secondary Identifier:  ? PAC:37145337
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G192700 0.5kb upstream 0.5kb upstream 3887 true Chr03: 41660002-41663888 Phaseolus vulgaris
Phvul.003G192700 0.5kb upstream 0.5kb upstream 500 false Chr03: 41663389-41663888 Phaseolus vulgaris
Phvul.003G192700 0.5kb downstream 0.5kb downstream 3887 true Chr03: 41659502-41663388 Phaseolus vulgaris
Phvul.003G192700 0.5kb downstream 0.5kb downstream 500 false Chr03: 41659502-41660001 Phaseolus vulgaris
Phvul.003G192700 1.0kb upstream 1.0kb upstream 4387 true Chr03: 41660002-41664388 Phaseolus vulgaris
Phvul.003G192700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 41663389-41664388 Phaseolus vulgaris
Phvul.003G192700 1.0kb downstream 1.0kb downstream 4387 true Chr03: 41659002-41663388 Phaseolus vulgaris
Phvul.003G192700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 41659002-41660001 Phaseolus vulgaris
Phvul.003G192700 2.0kb upstream 2.0kb upstream 5387 true Chr03: 41660002-41665388 Phaseolus vulgaris
Phvul.003G192700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 41663389-41665388 Phaseolus vulgaris
Phvul.003G192700 2.0kb downstream 2.0kb downstream 5387 true Chr03: 41658002-41663388 Phaseolus vulgaris
Phvul.003G192700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 41658002-41660001 Phaseolus vulgaris
Phvul.003G192700 5.0kb upstream 5.0kb upstream 8387 true Chr03: 41660002-41668388 Phaseolus vulgaris
Phvul.003G192700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 41663389-41668388 Phaseolus vulgaris
Phvul.003G192700 5.0kb downstream 5.0kb downstream 8387 true Chr03: 41655002-41663388 Phaseolus vulgaris
Phvul.003G192700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 41655002-41660001 Phaseolus vulgaris
Phvul.003G192700 10.0kb upstream 10.0kb upstream 13387 true Chr03: 41660002-41673388 Phaseolus vulgaris
Phvul.003G192700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 41663389-41673388 Phaseolus vulgaris
Phvul.003G192700 10.0kb downstream 10.0kb downstream 13387 true Chr03: 41650002-41663388 Phaseolus vulgaris
Phvul.003G192700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 41650002-41660001 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312030 5265 Fabidae View MSA
124068988 5270 Rosid View MSA
123744628 5271 Pentapetalae View MSA
122796204 5272 Eudicot View MSA
122042629 5273 Angiosperm View MSA
121344543 5274 Embryophyte View MSA
123427890 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.18915 0.0 5.19538    
cufflinks 0.254518 0.0 1.02823 Low  
cufflinks 0.340951 0.0 1.65696 Low  
cufflinks 1.29904 0.0 7.08378    
cufflinks 1.67684 0.0 8.59269    
cufflinks 0.115464 0.0 0.502287 Low Low
cufflinks 29.065 0.0 91.7721 High High
cufflinks 144.113 0.0 531.817 High High
cufflinks 23.4553 0.0 75.2377   High
cufflinks 1.55635 0.0 8.29033    
cufflinks 0.7591 0.0 3.56403    

0 Strain