Gene : Phvul.003G191000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR23042:SF51 - TRANSCRIPTION FACTOR BHLH47 Genomic Order:  1932
Name:  ? Phvul.003G191000 Secondary Identifier:  ? PAC:37147488
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G191000 0.5kb upstream 0.5kb upstream 3163 true Chr03: 41474341-41477503 Phaseolus vulgaris
Phvul.003G191000 0.5kb upstream 0.5kb upstream 500 false Chr03: 41474341-41474840 Phaseolus vulgaris
Phvul.003G191000 0.5kb downstream 0.5kb downstream 3163 true Chr03: 41474841-41478003 Phaseolus vulgaris
Phvul.003G191000 0.5kb downstream 0.5kb downstream 500 false Chr03: 41477504-41478003 Phaseolus vulgaris
Phvul.003G191000 1.0kb upstream 1.0kb upstream 3663 true Chr03: 41473841-41477503 Phaseolus vulgaris
Phvul.003G191000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 41473841-41474840 Phaseolus vulgaris
Phvul.003G191000 1.0kb downstream 1.0kb downstream 3663 true Chr03: 41474841-41478503 Phaseolus vulgaris
Phvul.003G191000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 41477504-41478503 Phaseolus vulgaris
Phvul.003G191000 2.0kb upstream 2.0kb upstream 4663 true Chr03: 41472841-41477503 Phaseolus vulgaris
Phvul.003G191000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 41472841-41474840 Phaseolus vulgaris
Phvul.003G191000 2.0kb downstream 2.0kb downstream 4663 true Chr03: 41474841-41479503 Phaseolus vulgaris
Phvul.003G191000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 41477504-41479503 Phaseolus vulgaris
Phvul.003G191000 5.0kb upstream 5.0kb upstream 7663 true Chr03: 41469841-41477503 Phaseolus vulgaris
Phvul.003G191000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 41469841-41474840 Phaseolus vulgaris
Phvul.003G191000 5.0kb downstream 5.0kb downstream 7663 true Chr03: 41474841-41482503 Phaseolus vulgaris
Phvul.003G191000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 41477504-41482503 Phaseolus vulgaris
Phvul.003G191000 10.0kb upstream 10.0kb upstream 12663 true Chr03: 41464841-41477503 Phaseolus vulgaris
Phvul.003G191000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 41464841-41474840 Phaseolus vulgaris
Phvul.003G191000 10.0kb downstream 10.0kb downstream 12663 true Chr03: 41474841-41487503 Phaseolus vulgaris
Phvul.003G191000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 41477504-41487503 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308621 5265 Fabidae View MSA
124071212 5270 Rosid View MSA
123743361 5271 Pentapetalae View MSA
122787264 5272 Eudicot View MSA
122043647 5273 Angiosperm View MSA
121351586 5274 Embryophyte View MSA
123427389 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.5478 0.0 49.6637   High
cufflinks 7.72522 0.0 22.4228    
cufflinks 7.22548 0.0 21.0153    
cufflinks 10.8226 0.0 30.4241    
cufflinks 8.42183 0.0 24.3316    
cufflinks 7.49239 0.0 21.8036    
cufflinks 7.05605 0.0 20.6791    
cufflinks 6.63734 0.0 19.5329    
cufflinks 7.00005 0.0 20.5377    
cufflinks 9.36946 0.0 26.6749    
cufflinks 8.82259 0.0 25.3297    

0 Strain