Gene : Phvul.003G191500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10091:SF3 - ALDOSE 1-EPIMERASE Genomic Order:  1937
Name:  ? Phvul.003G191500 Secondary Identifier:  ? PAC:37146982
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY66-422 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G191500 0.5kb upstream 0.5kb upstream 2437 true Chr03: 41534477-41536913 Phaseolus vulgaris
Phvul.003G191500 0.5kb upstream 0.5kb upstream 500 false Chr03: 41536414-41536913 Phaseolus vulgaris
Phvul.003G191500 0.5kb downstream 0.5kb downstream 2437 true Chr03: 41533977-41536413 Phaseolus vulgaris
Phvul.003G191500 0.5kb downstream 0.5kb downstream 500 false Chr03: 41533977-41534476 Phaseolus vulgaris
Phvul.003G191500 1.0kb upstream 1.0kb upstream 2937 true Chr03: 41534477-41537413 Phaseolus vulgaris
Phvul.003G191500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 41536414-41537413 Phaseolus vulgaris
Phvul.003G191500 1.0kb downstream 1.0kb downstream 2937 true Chr03: 41533477-41536413 Phaseolus vulgaris
Phvul.003G191500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 41533477-41534476 Phaseolus vulgaris
Phvul.003G191500 2.0kb upstream 2.0kb upstream 3937 true Chr03: 41534477-41538413 Phaseolus vulgaris
Phvul.003G191500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 41536414-41538413 Phaseolus vulgaris
Phvul.003G191500 2.0kb downstream 2.0kb downstream 3937 true Chr03: 41532477-41536413 Phaseolus vulgaris
Phvul.003G191500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 41532477-41534476 Phaseolus vulgaris
Phvul.003G191500 5.0kb upstream 5.0kb upstream 6937 true Chr03: 41534477-41541413 Phaseolus vulgaris
Phvul.003G191500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 41536414-41541413 Phaseolus vulgaris
Phvul.003G191500 5.0kb downstream 5.0kb downstream 6937 true Chr03: 41529477-41536413 Phaseolus vulgaris
Phvul.003G191500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 41529477-41534476 Phaseolus vulgaris
Phvul.003G191500 10.0kb upstream 10.0kb upstream 11937 true Chr03: 41534477-41546413 Phaseolus vulgaris
Phvul.003G191500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 41536414-41546413 Phaseolus vulgaris
Phvul.003G191500 10.0kb downstream 10.0kb downstream 11937 true Chr03: 41524477-41536413 Phaseolus vulgaris
Phvul.003G191500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 41524477-41534476 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308782 5265 Fabidae View MSA
124062867 5270 Rosid View MSA
123744295 5271 Pentapetalae View MSA
122796241 5272 Eudicot View MSA
122044460 5273 Angiosperm View MSA
121310296 5274 Embryophyte View MSA
123425845 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.756451 0.0 2.7995    
cufflinks 11.3648 0.0 31.4786   High
cufflinks 0.101738 0.0 0.443422 Low  
cufflinks 0.857822 0.0 3.14915    
cufflinks 0.160019 0.0 0.674874 Low  
cufflinks 0.0747543 0.0 0.335496 Low Low
cufflinks 0.0647546 0.0 0.294827 Low Low
cufflinks 0.325082 0.0 1.27964 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.315185 0.0 1.25134 Low  
cufflinks 0.465306 0.0 1.79635 Low  

0 Strain