Gene : Phvul.003G192000 P. vulgaris v2.1
Defline:  (1 of 91) PF03106 - WRKY DNA -binding domain (WRKY) Genomic Order:  1942
Name:  ? Phvul.003G192000 Secondary Identifier:  ? PAC:37148044
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G192000 0.5kb upstream 0.5kb upstream 5012 true Chr03: 41597526-41602537 Phaseolus vulgaris
Phvul.003G192000 0.5kb upstream 0.5kb upstream 500 false Chr03: 41602038-41602537 Phaseolus vulgaris
Phvul.003G192000 0.5kb downstream 0.5kb downstream 5012 true Chr03: 41597026-41602037 Phaseolus vulgaris
Phvul.003G192000 0.5kb downstream 0.5kb downstream 500 false Chr03: 41597026-41597525 Phaseolus vulgaris
Phvul.003G192000 1.0kb upstream 1.0kb upstream 5512 true Chr03: 41597526-41603037 Phaseolus vulgaris
Phvul.003G192000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 41602038-41603037 Phaseolus vulgaris
Phvul.003G192000 1.0kb downstream 1.0kb downstream 5512 true Chr03: 41596526-41602037 Phaseolus vulgaris
Phvul.003G192000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 41596526-41597525 Phaseolus vulgaris
Phvul.003G192000 2.0kb upstream 2.0kb upstream 6512 true Chr03: 41597526-41604037 Phaseolus vulgaris
Phvul.003G192000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 41602038-41604037 Phaseolus vulgaris
Phvul.003G192000 2.0kb downstream 2.0kb downstream 6512 true Chr03: 41595526-41602037 Phaseolus vulgaris
Phvul.003G192000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 41595526-41597525 Phaseolus vulgaris
Phvul.003G192000 5.0kb upstream 5.0kb upstream 9512 true Chr03: 41597526-41607037 Phaseolus vulgaris
Phvul.003G192000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 41602038-41607037 Phaseolus vulgaris
Phvul.003G192000 5.0kb downstream 5.0kb downstream 9512 true Chr03: 41592526-41602037 Phaseolus vulgaris
Phvul.003G192000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 41592526-41597525 Phaseolus vulgaris
Phvul.003G192000 10.0kb upstream 10.0kb upstream 14512 true Chr03: 41597526-41612037 Phaseolus vulgaris
Phvul.003G192000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 41602038-41612037 Phaseolus vulgaris
Phvul.003G192000 10.0kb downstream 10.0kb downstream 14512 true Chr03: 41587526-41602037 Phaseolus vulgaris
Phvul.003G192000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 41587526-41597525 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311406 5265 Fabidae View MSA
124070003 5270 Rosid View MSA
123745248 5271 Pentapetalae View MSA
122796714 5272 Eudicot View MSA
122044193 5273 Angiosperm View MSA
121350483 5274 Embryophyte View MSA
123381752 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.398259 0.0 1.44632 Low  
cufflinks 0.120489 0.0 0.482324 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0489634 0.0 0.212327 Low  
cufflinks 0.0691745 0.0 0.29174 Low  
cufflinks 0.0328304 0.0 0.147342 Low  
cufflinks 19.6671 0.0 50.8839   High
cufflinks 5.36189 0.0 14.6682   High
cufflinks 22.8194 0.0 59.2192   High
cufflinks 0.0274342 0.0 0.125809 Low  
cufflinks 0.0268573 0.0 0.123737 Low  

0 Strain