Gene : Phvul.003G180100 P. vulgaris v2.1
Genomic Order:  1825 Name:  ? Phvul.003G180100
Secondary Identifier:  ? PAC:37146418
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G180100 0.5kb upstream 0.5kb upstream 3508 true Chr03: 40308250-40311757 Phaseolus vulgaris
Phvul.003G180100 0.5kb upstream 0.5kb upstream 500 false Chr03: 40308250-40308749 Phaseolus vulgaris
Phvul.003G180100 0.5kb downstream 0.5kb downstream 3508 true Chr03: 40308750-40312257 Phaseolus vulgaris
Phvul.003G180100 0.5kb downstream 0.5kb downstream 500 false Chr03: 40311758-40312257 Phaseolus vulgaris
Phvul.003G180100 1.0kb upstream 1.0kb upstream 4008 true Chr03: 40307750-40311757 Phaseolus vulgaris
Phvul.003G180100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 40307750-40308749 Phaseolus vulgaris
Phvul.003G180100 1.0kb downstream 1.0kb downstream 4008 true Chr03: 40308750-40312757 Phaseolus vulgaris
Phvul.003G180100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 40311758-40312757 Phaseolus vulgaris
Phvul.003G180100 2.0kb upstream 2.0kb upstream 5008 true Chr03: 40306750-40311757 Phaseolus vulgaris
Phvul.003G180100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 40306750-40308749 Phaseolus vulgaris
Phvul.003G180100 2.0kb downstream 2.0kb downstream 5008 true Chr03: 40308750-40313757 Phaseolus vulgaris
Phvul.003G180100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 40311758-40313757 Phaseolus vulgaris
Phvul.003G180100 5.0kb upstream 5.0kb upstream 8008 true Chr03: 40303750-40311757 Phaseolus vulgaris
Phvul.003G180100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 40303750-40308749 Phaseolus vulgaris
Phvul.003G180100 5.0kb downstream 5.0kb downstream 8008 true Chr03: 40308750-40316757 Phaseolus vulgaris
Phvul.003G180100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 40311758-40316757 Phaseolus vulgaris
Phvul.003G180100 10.0kb upstream 10.0kb upstream 13008 true Chr03: 40298750-40311757 Phaseolus vulgaris
Phvul.003G180100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 40298750-40308749 Phaseolus vulgaris
Phvul.003G180100 10.0kb downstream 10.0kb downstream 13008 true Chr03: 40308750-40321757 Phaseolus vulgaris
Phvul.003G180100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 40311758-40321757 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041508 5273 Angiosperm View MSA
122304765 5265 Fabidae View MSA
124067334 5270 Rosid View MSA
123738970 5271 Pentapetalae View MSA
122793267 5272 Eudicot View MSA
121347966 5274 Embryophyte View MSA
123427649 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.9822 0.0 67.2157    
cufflinks 31.8276 0.0 82.2873    
cufflinks 357.237 0.0 1198.96 High High
cufflinks 32.2379 0.0 83.3648    
cufflinks 13.5862 0.0 36.2052    
cufflinks 163.279 0.0 479.028 High High
cufflinks 2.79098 0.0 8.65147   Low
cufflinks 6.17062 0.0 17.5273    
cufflinks 2.22991 0.0 7.08775   Low
cufflinks 17.8031 0.0 46.598    
cufflinks 14.91 0.0 39.4562    

0 Strain