Gene : Phvul.003G181400 P. vulgaris v2.1
Defline:  (1 of 2) K04773 - protease IV [EC:3.4.21.-] (sppA) Genomic Order:  1838
Name:  ? Phvul.003G181400 Secondary Identifier:  ? PAC:37147904
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G181400 0.5kb upstream 0.5kb upstream 9490 true Chr03: 40421927-40431416 Phaseolus vulgaris
Phvul.003G181400 0.5kb upstream 0.5kb upstream 500 false Chr03: 40421927-40422426 Phaseolus vulgaris
Phvul.003G181400 0.5kb downstream 0.5kb downstream 9490 true Chr03: 40422427-40431916 Phaseolus vulgaris
Phvul.003G181400 0.5kb downstream 0.5kb downstream 500 false Chr03: 40431417-40431916 Phaseolus vulgaris
Phvul.003G181400 1.0kb upstream 1.0kb upstream 9990 true Chr03: 40421427-40431416 Phaseolus vulgaris
Phvul.003G181400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 40421427-40422426 Phaseolus vulgaris
Phvul.003G181400 1.0kb downstream 1.0kb downstream 9990 true Chr03: 40422427-40432416 Phaseolus vulgaris
Phvul.003G181400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 40431417-40432416 Phaseolus vulgaris
Phvul.003G181400 2.0kb upstream 2.0kb upstream 10990 true Chr03: 40420427-40431416 Phaseolus vulgaris
Phvul.003G181400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 40420427-40422426 Phaseolus vulgaris
Phvul.003G181400 2.0kb downstream 2.0kb downstream 10990 true Chr03: 40422427-40433416 Phaseolus vulgaris
Phvul.003G181400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 40431417-40433416 Phaseolus vulgaris
Phvul.003G181400 5.0kb upstream 5.0kb upstream 13990 true Chr03: 40417427-40431416 Phaseolus vulgaris
Phvul.003G181400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 40417427-40422426 Phaseolus vulgaris
Phvul.003G181400 5.0kb downstream 5.0kb downstream 13990 true Chr03: 40422427-40436416 Phaseolus vulgaris
Phvul.003G181400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 40431417-40436416 Phaseolus vulgaris
Phvul.003G181400 10.0kb upstream 10.0kb upstream 18990 true Chr03: 40412427-40431416 Phaseolus vulgaris
Phvul.003G181400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 40412427-40422426 Phaseolus vulgaris
Phvul.003G181400 10.0kb downstream 10.0kb downstream 18990 true Chr03: 40422427-40441416 Phaseolus vulgaris
Phvul.003G181400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 40431417-40441416 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297022 5265 Fabidae View MSA
124067655 5270 Rosid View MSA
123738820 5271 Pentapetalae View MSA
122785684 5272 Eudicot View MSA
122045424 5273 Angiosperm View MSA
121344928 5274 Embryophyte View MSA
123424112 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.38998 0.0 24.8173    
cufflinks 9.99489 0.0 26.3472    
cufflinks 9.89289 0.0 26.0725    
cufflinks 17.0973 0.0 44.2542   High
cufflinks 9.62442 0.0 25.5211    
cufflinks 5.71261 0.0 15.7279   Low
cufflinks 6.69543 0.0 18.161   Low
cufflinks 10.4747 0.0 27.4679    
cufflinks 7.84129 0.0 21.0547    
cufflinks 19.2164 0.0 49.6711   High
cufflinks 8.13079 0.0 21.798    

0 Strain