Gene : Phvul.003G180300 P. vulgaris v2.1
Defline:  (1 of 17) PF00335 - Tetraspanin family (Tetraspannin) Genomic Order:  1827
Name:  ? Phvul.003G180300 Secondary Identifier:  ? PAC:37146409
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G180300 0.5kb upstream 0.5kb upstream 1530 true Chr03: 40317760-40319289 Phaseolus vulgaris
Phvul.003G180300 0.5kb upstream 0.5kb upstream 500 false Chr03: 40318790-40319289 Phaseolus vulgaris
Phvul.003G180300 0.5kb downstream 0.5kb downstream 1530 true Chr03: 40317260-40318789 Phaseolus vulgaris
Phvul.003G180300 0.5kb downstream 0.5kb downstream 500 false Chr03: 40317260-40317759 Phaseolus vulgaris
Phvul.003G180300 1.0kb upstream 1.0kb upstream 2030 true Chr03: 40317760-40319789 Phaseolus vulgaris
Phvul.003G180300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 40318790-40319789 Phaseolus vulgaris
Phvul.003G180300 1.0kb downstream 1.0kb downstream 2030 true Chr03: 40316760-40318789 Phaseolus vulgaris
Phvul.003G180300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 40316760-40317759 Phaseolus vulgaris
Phvul.003G180300 2.0kb upstream 2.0kb upstream 3030 true Chr03: 40317760-40320789 Phaseolus vulgaris
Phvul.003G180300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 40318790-40320789 Phaseolus vulgaris
Phvul.003G180300 2.0kb downstream 2.0kb downstream 3030 true Chr03: 40315760-40318789 Phaseolus vulgaris
Phvul.003G180300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 40315760-40317759 Phaseolus vulgaris
Phvul.003G180300 5.0kb upstream 5.0kb upstream 6030 true Chr03: 40317760-40323789 Phaseolus vulgaris
Phvul.003G180300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 40318790-40323789 Phaseolus vulgaris
Phvul.003G180300 5.0kb downstream 5.0kb downstream 6030 true Chr03: 40312760-40318789 Phaseolus vulgaris
Phvul.003G180300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 40312760-40317759 Phaseolus vulgaris
Phvul.003G180300 10.0kb upstream 10.0kb upstream 11030 true Chr03: 40317760-40328789 Phaseolus vulgaris
Phvul.003G180300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 40318790-40328789 Phaseolus vulgaris
Phvul.003G180300 10.0kb downstream 10.0kb downstream 11030 true Chr03: 40307760-40318789 Phaseolus vulgaris
Phvul.003G180300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 40307760-40317759 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791931 5273 Angiosperm View MSA
122305021 5265 Fabidae View MSA
124050628 5270 Rosid View MSA
123747600 5271 Pentapetalae View MSA
122795388 5272 Eudicot View MSA
121063199 5274 Embryophyte View MSA
123102968 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0860456 0.0 0.396059 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.138796 0.0 0.601881 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0548537 0.0 0.264478 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain