Gene : Phvul.003G180800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10285:SF76 - URIDINE KINASE Genomic Order:  1832
Name:  ? Phvul.003G180800 Secondary Identifier:  ? PAC:37146756
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7193 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7196 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G180800 0.5kb upstream 0.5kb upstream 14803 true Chr03: 40345195-40359997 Phaseolus vulgaris
Phvul.003G180800 0.5kb upstream 0.5kb upstream 500 false Chr03: 40345195-40345694 Phaseolus vulgaris
Phvul.003G180800 0.5kb downstream 0.5kb downstream 14803 true Chr03: 40345695-40360497 Phaseolus vulgaris
Phvul.003G180800 0.5kb downstream 0.5kb downstream 500 false Chr03: 40359998-40360497 Phaseolus vulgaris
Phvul.003G180800 1.0kb upstream 1.0kb upstream 15303 true Chr03: 40344695-40359997 Phaseolus vulgaris
Phvul.003G180800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 40344695-40345694 Phaseolus vulgaris
Phvul.003G180800 1.0kb downstream 1.0kb downstream 15303 true Chr03: 40345695-40360997 Phaseolus vulgaris
Phvul.003G180800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 40359998-40360997 Phaseolus vulgaris
Phvul.003G180800 2.0kb upstream 2.0kb upstream 16303 true Chr03: 40343695-40359997 Phaseolus vulgaris
Phvul.003G180800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 40343695-40345694 Phaseolus vulgaris
Phvul.003G180800 2.0kb downstream 2.0kb downstream 16303 true Chr03: 40345695-40361997 Phaseolus vulgaris
Phvul.003G180800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 40359998-40361997 Phaseolus vulgaris
Phvul.003G180800 5.0kb upstream 5.0kb upstream 19303 true Chr03: 40340695-40359997 Phaseolus vulgaris
Phvul.003G180800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 40340695-40345694 Phaseolus vulgaris
Phvul.003G180800 5.0kb downstream 5.0kb downstream 19303 true Chr03: 40345695-40364997 Phaseolus vulgaris
Phvul.003G180800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 40359998-40364997 Phaseolus vulgaris
Phvul.003G180800 10.0kb upstream 10.0kb upstream 24303 true Chr03: 40335695-40359997 Phaseolus vulgaris
Phvul.003G180800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 40335695-40345694 Phaseolus vulgaris
Phvul.003G180800 10.0kb downstream 10.0kb downstream 24303 true Chr03: 40345695-40369997 Phaseolus vulgaris
Phvul.003G180800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 40359998-40369997 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300917 5265 Fabidae View MSA
124070976 5270 Rosid View MSA
123746405 5271 Pentapetalae View MSA
122786866 5272 Eudicot View MSA
122043584 5273 Angiosperm View MSA
121351427 5274 Embryophyte View MSA
123427517 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.097 0.0 46.1001    
cufflinks 10.0276 0.0 34.5807    
cufflinks 19.1663 0.0 61.8293   High
cufflinks 6.89689 0.0 21.6242    
cufflinks 7.24572 0.0 22.6816    
cufflinks 16.5746 0.0 53.7014   High
cufflinks 6.21019 0.0 19.7411    
cufflinks 4.66189 0.0 18.1914   Low
cufflinks 5.44966 0.0 20.8859   Low
cufflinks 19.0233 0.0 61.6222   High
cufflinks 8.03169 0.0 24.7524    

0 Strain