Gene : Phvul.003G184600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10202:SF13 - PRESENILIN-2 Genomic Order:  1870
Name:  ? Phvul.003G184600 Secondary Identifier:  ? PAC:37146754
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G184600 0.5kb upstream 0.5kb upstream 1865 true Chr03: 40780060-40781924 Phaseolus vulgaris
Phvul.003G184600 0.5kb upstream 0.5kb upstream 500 false Chr03: 40781425-40781924 Phaseolus vulgaris
Phvul.003G184600 0.5kb downstream 0.5kb downstream 1865 true Chr03: 40779560-40781424 Phaseolus vulgaris
Phvul.003G184600 0.5kb downstream 0.5kb downstream 500 false Chr03: 40779560-40780059 Phaseolus vulgaris
Phvul.003G184600 1.0kb upstream 1.0kb upstream 2365 true Chr03: 40780060-40782424 Phaseolus vulgaris
Phvul.003G184600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 40781425-40782424 Phaseolus vulgaris
Phvul.003G184600 1.0kb downstream 1.0kb downstream 2365 true Chr03: 40779060-40781424 Phaseolus vulgaris
Phvul.003G184600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 40779060-40780059 Phaseolus vulgaris
Phvul.003G184600 2.0kb upstream 2.0kb upstream 3365 true Chr03: 40780060-40783424 Phaseolus vulgaris
Phvul.003G184600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 40781425-40783424 Phaseolus vulgaris
Phvul.003G184600 2.0kb downstream 2.0kb downstream 3365 true Chr03: 40778060-40781424 Phaseolus vulgaris
Phvul.003G184600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 40778060-40780059 Phaseolus vulgaris
Phvul.003G184600 5.0kb upstream 5.0kb upstream 6365 true Chr03: 40780060-40786424 Phaseolus vulgaris
Phvul.003G184600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 40781425-40786424 Phaseolus vulgaris
Phvul.003G184600 5.0kb downstream 5.0kb downstream 6365 true Chr03: 40775060-40781424 Phaseolus vulgaris
Phvul.003G184600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 40775060-40780059 Phaseolus vulgaris
Phvul.003G184600 10.0kb upstream 10.0kb upstream 11365 true Chr03: 40780060-40791424 Phaseolus vulgaris
Phvul.003G184600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 40781425-40791424 Phaseolus vulgaris
Phvul.003G184600 10.0kb downstream 10.0kb downstream 11365 true Chr03: 40770060-40781424 Phaseolus vulgaris
Phvul.003G184600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 40770060-40780059 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299279 5265 Fabidae View MSA
124063592 5270 Rosid View MSA
123748546 5271 Pentapetalae View MSA
122790840 5272 Eudicot View MSA
122049657 5273 Angiosperm View MSA
121347498 5274 Embryophyte View MSA
123424512 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.29294 0.0 15.3627   Low
cufflinks 7.96479 0.0 22.2689    
cufflinks 5.33052 0.0 15.5555   Low
cufflinks 12.293 0.0 33.1946   High
cufflinks 9.18521 0.0 25.3563    
cufflinks 7.6335 0.0 21.4316    
cufflinks 7.01764 0.0 19.8013    
cufflinks 7.73261 0.0 21.6595    
cufflinks 9.12636 0.0 25.244    
cufflinks 6.82781 0.0 19.3348    
cufflinks 10.4947 0.0 28.6251   High

0 Strain