Gene : Phvul.003G239800 P. vulgaris v2.1
Genomic Order:  2432 Name:  ? Phvul.003G239800
Secondary Identifier:  ? PAC:37144932
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G239800 0.5kb upstream 0.5kb upstream 1161 true Chr03: 47395102-47396262 Phaseolus vulgaris
Phvul.003G239800 0.5kb upstream 0.5kb upstream 500 false Chr03: 47395102-47395601 Phaseolus vulgaris
Phvul.003G239800 0.5kb downstream 0.5kb downstream 1161 true Chr03: 47395602-47396762 Phaseolus vulgaris
Phvul.003G239800 0.5kb downstream 0.5kb downstream 500 false Chr03: 47396263-47396762 Phaseolus vulgaris
Phvul.003G239800 1.0kb upstream 1.0kb upstream 1661 true Chr03: 47394602-47396262 Phaseolus vulgaris
Phvul.003G239800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 47394602-47395601 Phaseolus vulgaris
Phvul.003G239800 1.0kb downstream 1.0kb downstream 1661 true Chr03: 47395602-47397262 Phaseolus vulgaris
Phvul.003G239800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 47396263-47397262 Phaseolus vulgaris
Phvul.003G239800 2.0kb upstream 2.0kb upstream 2661 true Chr03: 47393602-47396262 Phaseolus vulgaris
Phvul.003G239800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 47393602-47395601 Phaseolus vulgaris
Phvul.003G239800 2.0kb downstream 2.0kb downstream 2661 true Chr03: 47395602-47398262 Phaseolus vulgaris
Phvul.003G239800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 47396263-47398262 Phaseolus vulgaris
Phvul.003G239800 5.0kb upstream 5.0kb upstream 5661 true Chr03: 47390602-47396262 Phaseolus vulgaris
Phvul.003G239800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 47390602-47395601 Phaseolus vulgaris
Phvul.003G239800 5.0kb downstream 5.0kb downstream 5661 true Chr03: 47395602-47401262 Phaseolus vulgaris
Phvul.003G239800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 47396263-47401262 Phaseolus vulgaris
Phvul.003G239800 10.0kb upstream 10.0kb upstream 10661 true Chr03: 47385602-47396262 Phaseolus vulgaris
Phvul.003G239800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 47385602-47395601 Phaseolus vulgaris
Phvul.003G239800 10.0kb downstream 10.0kb downstream 10661 true Chr03: 47395602-47406262 Phaseolus vulgaris
Phvul.003G239800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 47396263-47406262 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792041 5273 Angiosperm View MSA
122314474 5265 Fabidae View MSA
124071896 5270 Rosid View MSA
123753077 5271 Pentapetalae View MSA
122796061 5272 Eudicot View MSA
121063299 5274 Embryophyte View MSA
123103061 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.58937 0.0 28.7114   High
cufflinks 6.18645 0.0 19.5816    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.32578 0.0 4.92726    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.21347 0.0 0.921105 Low Low
cufflinks 4.53393 0.0 14.7517    
cufflinks 6.19666 0.0 19.5231    
cufflinks 0.255495 0.0 1.08037 Low Low
cufflinks 2.32986 0.0 8.2511    
cufflinks 0.271542 0.0 1.14508 Low Low

0 Strain