Gene : Phvul.003G293800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31003:SF7 - F14J22.20 PROTEIN Genomic Order:  2986
Name:  ? Phvul.003G293800 Secondary Identifier:  ? PAC:37145982
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G293800 0.5kb upstream 0.5kb upstream 3230 true Chr03: 53087798-53091027 Phaseolus vulgaris
Phvul.003G293800 0.5kb upstream 0.5kb upstream 500 false Chr03: 53087798-53088297 Phaseolus vulgaris
Phvul.003G293800 0.5kb downstream 0.5kb downstream 3230 true Chr03: 53088298-53091527 Phaseolus vulgaris
Phvul.003G293800 0.5kb downstream 0.5kb downstream 500 false Chr03: 53091028-53091527 Phaseolus vulgaris
Phvul.003G293800 1.0kb upstream 1.0kb upstream 3730 true Chr03: 53087298-53091027 Phaseolus vulgaris
Phvul.003G293800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 53087298-53088297 Phaseolus vulgaris
Phvul.003G293800 1.0kb downstream 1.0kb downstream 3730 true Chr03: 53088298-53092027 Phaseolus vulgaris
Phvul.003G293800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 53091028-53092027 Phaseolus vulgaris
Phvul.003G293800 2.0kb upstream 2.0kb upstream 4730 true Chr03: 53086298-53091027 Phaseolus vulgaris
Phvul.003G293800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 53086298-53088297 Phaseolus vulgaris
Phvul.003G293800 2.0kb downstream 2.0kb downstream 4730 true Chr03: 53088298-53093027 Phaseolus vulgaris
Phvul.003G293800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 53091028-53093027 Phaseolus vulgaris
Phvul.003G293800 5.0kb upstream 5.0kb upstream 7730 true Chr03: 53083298-53091027 Phaseolus vulgaris
Phvul.003G293800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 53083298-53088297 Phaseolus vulgaris
Phvul.003G293800 5.0kb downstream 5.0kb downstream 7730 true Chr03: 53088298-53096027 Phaseolus vulgaris
Phvul.003G293800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 53091028-53096027 Phaseolus vulgaris
Phvul.003G293800 10.0kb upstream 10.0kb upstream 12730 true Chr03: 53078298-53091027 Phaseolus vulgaris
Phvul.003G293800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 53078298-53088297 Phaseolus vulgaris
Phvul.003G293800 10.0kb downstream 10.0kb downstream 12730 true Chr03: 53088298-53101027 Phaseolus vulgaris
Phvul.003G293800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 53091028-53101027 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307676 5265 Fabidae View MSA
124070700 5270 Rosid View MSA
123742212 5271 Pentapetalae View MSA
122792121 5272 Eudicot View MSA
122049766 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.837 0.0 69.4241   High
cufflinks 17.0713 0.0 44.3637    
cufflinks 16.6354 0.0 43.269    
cufflinks 8.4888 0.0 23.0408    
cufflinks 13.9054 0.0 36.5097    
cufflinks 2.49651 0.0 7.67998   Low
cufflinks 3.63632 0.0 10.6448   Low
cufflinks 2.4309 0.0 7.47584   Low
cufflinks 9.17374 0.0 24.6708    
cufflinks 15.0012 0.0 39.1994    
cufflinks 5.67512 0.0 15.9793    

0 Strain