Gene : Phvul.003G292300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12560:SF12 - LAG1 LONGEVITY ASSURANCE HOMOLOG 2 Genomic Order:  2971
Name:  ? Phvul.003G292300 Secondary Identifier:  ? PAC:37146355
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G292300 0.5kb upstream 0.5kb upstream 5811 true Chr03: 52983421-52989231 Phaseolus vulgaris
Phvul.003G292300 0.5kb upstream 0.5kb upstream 500 false Chr03: 52983421-52983920 Phaseolus vulgaris
Phvul.003G292300 0.5kb downstream 0.5kb downstream 5811 true Chr03: 52983921-52989731 Phaseolus vulgaris
Phvul.003G292300 0.5kb downstream 0.5kb downstream 500 false Chr03: 52989232-52989731 Phaseolus vulgaris
Phvul.003G292300 1.0kb upstream 1.0kb upstream 6311 true Chr03: 52982921-52989231 Phaseolus vulgaris
Phvul.003G292300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 52982921-52983920 Phaseolus vulgaris
Phvul.003G292300 1.0kb downstream 1.0kb downstream 6311 true Chr03: 52983921-52990231 Phaseolus vulgaris
Phvul.003G292300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 52989232-52990231 Phaseolus vulgaris
Phvul.003G292300 2.0kb upstream 2.0kb upstream 7311 true Chr03: 52981921-52989231 Phaseolus vulgaris
Phvul.003G292300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 52981921-52983920 Phaseolus vulgaris
Phvul.003G292300 2.0kb downstream 2.0kb downstream 7311 true Chr03: 52983921-52991231 Phaseolus vulgaris
Phvul.003G292300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 52989232-52991231 Phaseolus vulgaris
Phvul.003G292300 5.0kb upstream 5.0kb upstream 10311 true Chr03: 52978921-52989231 Phaseolus vulgaris
Phvul.003G292300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 52978921-52983920 Phaseolus vulgaris
Phvul.003G292300 5.0kb downstream 5.0kb downstream 10311 true Chr03: 52983921-52994231 Phaseolus vulgaris
Phvul.003G292300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 52989232-52994231 Phaseolus vulgaris
Phvul.003G292300 10.0kb upstream 10.0kb upstream 15311 true Chr03: 52973921-52989231 Phaseolus vulgaris
Phvul.003G292300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 52973921-52983920 Phaseolus vulgaris
Phvul.003G292300 10.0kb downstream 10.0kb downstream 15311 true Chr03: 52983921-52999231 Phaseolus vulgaris
Phvul.003G292300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 52989232-52999231 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307357 5265 Fabidae View MSA
124063222 5270 Rosid View MSA
123739938 5271 Pentapetalae View MSA
122793716 5272 Eudicot View MSA
122045142 5273 Angiosperm View MSA
121349401 5274 Embryophyte View MSA
123428118 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.39645 0.0 18.6717    
cufflinks 4.83129 0.0 14.6113    
cufflinks 3.80604 0.0 11.7977   Low
cufflinks 9.82464 0.0 27.7061   High
cufflinks 5.2431 0.0 15.8223    
cufflinks 4.6067 0.0 14.0029    
cufflinks 3.9639 0.0 12.3111   Low
cufflinks 6.83419 0.0 19.8108    
cufflinks 4.75637 0.0 14.5322    
cufflinks 4.91153 0.0 14.8241    
cufflinks 5.3032 0.0 15.9578    

0 Strain