Gene : Phvul.003G243000 P. vulgaris v2.1
Defline:  (1 of 2) 6.3.4.21 - Nicotinate phosphoribosyltransferase / Nicotinic acid phosphoribosyltransferase Genomic Order:  2465
Name:  ? Phvul.003G243000 Secondary Identifier:  ? PAC:37148247
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5381 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G243000 0.5kb upstream 0.5kb upstream 10080 true Chr03: 47832274-47842353 Phaseolus vulgaris
Phvul.003G243000 0.5kb upstream 0.5kb upstream 500 false Chr03: 47832274-47832773 Phaseolus vulgaris
Phvul.003G243000 0.5kb downstream 0.5kb downstream 10080 true Chr03: 47832774-47842853 Phaseolus vulgaris
Phvul.003G243000 0.5kb downstream 0.5kb downstream 500 false Chr03: 47842354-47842853 Phaseolus vulgaris
Phvul.003G243000 1.0kb upstream 1.0kb upstream 10580 true Chr03: 47831774-47842353 Phaseolus vulgaris
Phvul.003G243000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 47831774-47832773 Phaseolus vulgaris
Phvul.003G243000 1.0kb downstream 1.0kb downstream 10580 true Chr03: 47832774-47843353 Phaseolus vulgaris
Phvul.003G243000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 47842354-47843353 Phaseolus vulgaris
Phvul.003G243000 2.0kb upstream 2.0kb upstream 11580 true Chr03: 47830774-47842353 Phaseolus vulgaris
Phvul.003G243000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 47830774-47832773 Phaseolus vulgaris
Phvul.003G243000 2.0kb downstream 2.0kb downstream 11580 true Chr03: 47832774-47844353 Phaseolus vulgaris
Phvul.003G243000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 47842354-47844353 Phaseolus vulgaris
Phvul.003G243000 5.0kb upstream 5.0kb upstream 14580 true Chr03: 47827774-47842353 Phaseolus vulgaris
Phvul.003G243000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 47827774-47832773 Phaseolus vulgaris
Phvul.003G243000 5.0kb downstream 5.0kb downstream 14580 true Chr03: 47832774-47847353 Phaseolus vulgaris
Phvul.003G243000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 47842354-47847353 Phaseolus vulgaris
Phvul.003G243000 10.0kb upstream 10.0kb upstream 19580 true Chr03: 47822774-47842353 Phaseolus vulgaris
Phvul.003G243000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 47822774-47832773 Phaseolus vulgaris
Phvul.003G243000 10.0kb downstream 10.0kb downstream 19580 true Chr03: 47832774-47852353 Phaseolus vulgaris
Phvul.003G243000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 47842354-47852353 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308114 5265 Fabidae View MSA
124065117 5270 Rosid View MSA
123744926 5271 Pentapetalae View MSA
122787936 5272 Eudicot View MSA
122047355 5273 Angiosperm View MSA
121346796 5274 Embryophyte View MSA
123425475 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.3825 0.0 55.2773    
cufflinks 10.6226 0.0 28.0154   Low
cufflinks 26.5564 0.0 68.896   High
cufflinks 14.2744 0.0 37.2146    
cufflinks 10.2645 0.0 27.1821   Low
cufflinks 18.8615 0.0 48.7638    
cufflinks 21.4381 0.0 55.4215    
cufflinks 18.4332 0.0 47.6539    
cufflinks 21.2429 0.0 54.9097    
cufflinks 12.656 0.0 33.0789    
cufflinks 14.469 0.0 37.6345    

0 Strain