Gene : Phvul.003G294300 P. vulgaris v2.1
Defline:  (1 of 3) PTHR24349//PTHR24349:SF115 - SERINE/THREONINE-PROTEIN KINASE // SUBFAMILY NOT NAMED Genomic Order:  2991
Name:  ? Phvul.003G294300 Secondary Identifier:  ? PAC:37144445
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G294300 0.5kb upstream 0.5kb upstream 5478 true Chr03: 53142513-53147990 Phaseolus vulgaris
Phvul.003G294300 0.5kb upstream 0.5kb upstream 500 false Chr03: 53142513-53143012 Phaseolus vulgaris
Phvul.003G294300 0.5kb downstream 0.5kb downstream 5478 true Chr03: 53143013-53148490 Phaseolus vulgaris
Phvul.003G294300 0.5kb downstream 0.5kb downstream 500 false Chr03: 53147991-53148490 Phaseolus vulgaris
Phvul.003G294300 1.0kb upstream 1.0kb upstream 5978 true Chr03: 53142013-53147990 Phaseolus vulgaris
Phvul.003G294300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 53142013-53143012 Phaseolus vulgaris
Phvul.003G294300 1.0kb downstream 1.0kb downstream 5978 true Chr03: 53143013-53148990 Phaseolus vulgaris
Phvul.003G294300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 53147991-53148990 Phaseolus vulgaris
Phvul.003G294300 2.0kb upstream 2.0kb upstream 6978 true Chr03: 53141013-53147990 Phaseolus vulgaris
Phvul.003G294300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 53141013-53143012 Phaseolus vulgaris
Phvul.003G294300 2.0kb downstream 2.0kb downstream 6978 true Chr03: 53143013-53149990 Phaseolus vulgaris
Phvul.003G294300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 53147991-53149990 Phaseolus vulgaris
Phvul.003G294300 5.0kb upstream 5.0kb upstream 9978 true Chr03: 53138013-53147990 Phaseolus vulgaris
Phvul.003G294300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 53138013-53143012 Phaseolus vulgaris
Phvul.003G294300 5.0kb downstream 5.0kb downstream 9978 true Chr03: 53143013-53152990 Phaseolus vulgaris
Phvul.003G294300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 53147991-53152990 Phaseolus vulgaris
Phvul.003G294300 10.0kb upstream 10.0kb upstream 14978 true Chr03: 53133013-53147990 Phaseolus vulgaris
Phvul.003G294300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 53133013-53143012 Phaseolus vulgaris
Phvul.003G294300 10.0kb downstream 10.0kb downstream 14978 true Chr03: 53143013-53157990 Phaseolus vulgaris
Phvul.003G294300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 53147991-53157990 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307585 5265 Fabidae View MSA
124071242 5270 Rosid View MSA
123749473 5271 Pentapetalae View MSA
122789222 5272 Eudicot View MSA
122047045 5273 Angiosperm View MSA
121343860 5274 Embryophyte View MSA
123379933 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.7054 0.0 51.0605    
cufflinks 9.73491 0.0 25.4618   Low
cufflinks 44.4426 0.0 120.308 High High
cufflinks 13.3502 0.0 34.5922   Low
cufflinks 33.9267 0.0 89.8566 High  
cufflinks 28.4382 0.0 74.5892    
cufflinks 24.4684 0.0 63.8759    
cufflinks 16.1509 0.0 41.7495    
cufflinks 28.4007 0.0 74.5254    
cufflinks 17.2607 0.0 44.6281    
cufflinks 28.3955 0.0 74.4861    

0 Strain