Gene : Phvul.003G295300 P. vulgaris v2.1
Defline:  (1 of 3) PTHR23024:SF157 - CARBOXYLESTERASE 12-RELATED Genomic Order:  3001
Name:  ? Phvul.003G295300 Secondary Identifier:  ? PAC:37146341
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6303 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G295300 0.5kb upstream 0.5kb upstream 1762 true Chr03: 53212092-53213853 Phaseolus vulgaris
Phvul.003G295300 0.5kb upstream 0.5kb upstream 500 false Chr03: 53212092-53212591 Phaseolus vulgaris
Phvul.003G295300 0.5kb downstream 0.5kb downstream 1762 true Chr03: 53212592-53214353 Phaseolus vulgaris
Phvul.003G295300 0.5kb downstream 0.5kb downstream 500 false Chr03: 53213854-53214353 Phaseolus vulgaris
Phvul.003G295300 1.0kb upstream 1.0kb upstream 2262 true Chr03: 53211592-53213853 Phaseolus vulgaris
Phvul.003G295300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 53211592-53212591 Phaseolus vulgaris
Phvul.003G295300 1.0kb downstream 1.0kb downstream 2262 true Chr03: 53212592-53214853 Phaseolus vulgaris
Phvul.003G295300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 53213854-53214853 Phaseolus vulgaris
Phvul.003G295300 2.0kb upstream 2.0kb upstream 3262 true Chr03: 53210592-53213853 Phaseolus vulgaris
Phvul.003G295300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 53210592-53212591 Phaseolus vulgaris
Phvul.003G295300 2.0kb downstream 2.0kb downstream 3262 true Chr03: 53212592-53215853 Phaseolus vulgaris
Phvul.003G295300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 53213854-53215853 Phaseolus vulgaris
Phvul.003G295300 5.0kb upstream 5.0kb upstream 6262 true Chr03: 53207592-53213853 Phaseolus vulgaris
Phvul.003G295300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 53207592-53212591 Phaseolus vulgaris
Phvul.003G295300 5.0kb downstream 5.0kb downstream 6262 true Chr03: 53212592-53218853 Phaseolus vulgaris
Phvul.003G295300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 53213854-53218853 Phaseolus vulgaris
Phvul.003G295300 10.0kb upstream 10.0kb upstream 11262 true Chr03: 53202592-53213853 Phaseolus vulgaris
Phvul.003G295300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 53202592-53212591 Phaseolus vulgaris
Phvul.003G295300 10.0kb downstream 10.0kb downstream 11262 true Chr03: 53212592-53223853 Phaseolus vulgaris
Phvul.003G295300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 53213854-53223853 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312214 5265 Fabidae View MSA
124074680 5270 Rosid View MSA
123751829 5271 Pentapetalae View MSA
122797555 5272 Eudicot View MSA
122051062 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350136 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 86.2171 0.0 236.2 High  
cufflinks 113.778 0.0 319.942 High  
cufflinks 102.117 0.0 282.546 High  
cufflinks 165.81 0.0 489.63 High High
cufflinks 145.383 0.0 423.819 High  
cufflinks 76.8687 0.0 207.856 High  
cufflinks 22.8258 0.0 59.0715   Low
cufflinks 28.4669 0.0 73.5821 High Low
cufflinks 32.0436 0.0 82.9156 High Low
cufflinks 151.901 0.0 442.906 High  
cufflinks 128.97 0.0 370.141 High  

0 Strain