Gene : Phvul.003G245101 P. vulgaris v2.1
Genomic Order:  2490 Name:  ? Phvul.003G245101
Secondary Identifier:  ? PAC:37147109
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G245101 0.5kb upstream 0.5kb upstream 1178 true Chr03: 48174307-48175484 Phaseolus vulgaris
Phvul.003G245101 0.5kb upstream 0.5kb upstream 500 false Chr03: 48174307-48174806 Phaseolus vulgaris
Phvul.003G245101 0.5kb downstream 0.5kb downstream 1178 true Chr03: 48174807-48175984 Phaseolus vulgaris
Phvul.003G245101 0.5kb downstream 0.5kb downstream 500 false Chr03: 48175485-48175984 Phaseolus vulgaris
Phvul.003G245101 1.0kb upstream 1.0kb upstream 1678 true Chr03: 48173807-48175484 Phaseolus vulgaris
Phvul.003G245101 1.0kb upstream 1.0kb upstream 1000 false Chr03: 48173807-48174806 Phaseolus vulgaris
Phvul.003G245101 1.0kb downstream 1.0kb downstream 1678 true Chr03: 48174807-48176484 Phaseolus vulgaris
Phvul.003G245101 1.0kb downstream 1.0kb downstream 1000 false Chr03: 48175485-48176484 Phaseolus vulgaris
Phvul.003G245101 2.0kb upstream 2.0kb upstream 2678 true Chr03: 48172807-48175484 Phaseolus vulgaris
Phvul.003G245101 2.0kb upstream 2.0kb upstream 2000 false Chr03: 48172807-48174806 Phaseolus vulgaris
Phvul.003G245101 2.0kb downstream 2.0kb downstream 2678 true Chr03: 48174807-48177484 Phaseolus vulgaris
Phvul.003G245101 2.0kb downstream 2.0kb downstream 2000 false Chr03: 48175485-48177484 Phaseolus vulgaris
Phvul.003G245101 5.0kb upstream 5.0kb upstream 5678 true Chr03: 48169807-48175484 Phaseolus vulgaris
Phvul.003G245101 5.0kb upstream 5.0kb upstream 5000 false Chr03: 48169807-48174806 Phaseolus vulgaris
Phvul.003G245101 5.0kb downstream 5.0kb downstream 5678 true Chr03: 48174807-48180484 Phaseolus vulgaris
Phvul.003G245101 5.0kb downstream 5.0kb downstream 5000 false Chr03: 48175485-48180484 Phaseolus vulgaris
Phvul.003G245101 10.0kb upstream 10.0kb upstream 10678 true Chr03: 48164807-48175484 Phaseolus vulgaris
Phvul.003G245101 10.0kb upstream 10.0kb upstream 10000 false Chr03: 48164807-48174806 Phaseolus vulgaris
Phvul.003G245101 10.0kb downstream 10.0kb downstream 10678 true Chr03: 48174807-48185484 Phaseolus vulgaris
Phvul.003G245101 10.0kb downstream 10.0kb downstream 10000 false Chr03: 48175485-48185484 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122251356 5265 Fabidae Singleton cluster - no MSA
123994319 5270 Rosid Singleton cluster - no MSA
123748035 5271 Pentapetalae View MSA
122772407 5272 Eudicot View MSA
122044935 5273 Angiosperm View MSA
121310364 5274 Embryophyte View MSA
123347866 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.82767 0.0 6.71919    
cufflinks 0.748932 0.0 2.95577    
cufflinks 0.117132 0.0 0.547087 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.62913 0.0 9.41    
cufflinks 0.772193 0.0 3.03982    
cufflinks 22.1505 0.0 61.9288   High
cufflinks 7.74228 0.0 24.2225    
cufflinks 3.90271 0.0 13.1867    
cufflinks 0.0360702 0.0 0.192936 Low Low
cufflinks 45.7079 0.0 121.222 High High

0 Strain