Gene : Phvul.003G244900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12864//PTHR12864:SF13 - RAN BINDING PROTEIN 9-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2488
Name:  ? Phvul.003G244900 Secondary Identifier:  ? PAC:37145875
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G244900 0.5kb upstream 0.5kb upstream 10080 true Chr03: 48141708-48151787 Phaseolus vulgaris
Phvul.003G244900 0.5kb upstream 0.5kb upstream 500 false Chr03: 48141708-48142207 Phaseolus vulgaris
Phvul.003G244900 0.5kb downstream 0.5kb downstream 10080 true Chr03: 48142208-48152287 Phaseolus vulgaris
Phvul.003G244900 0.5kb downstream 0.5kb downstream 500 false Chr03: 48151788-48152287 Phaseolus vulgaris
Phvul.003G244900 1.0kb upstream 1.0kb upstream 10580 true Chr03: 48141208-48151787 Phaseolus vulgaris
Phvul.003G244900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 48141208-48142207 Phaseolus vulgaris
Phvul.003G244900 1.0kb downstream 1.0kb downstream 10580 true Chr03: 48142208-48152787 Phaseolus vulgaris
Phvul.003G244900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 48151788-48152787 Phaseolus vulgaris
Phvul.003G244900 2.0kb upstream 2.0kb upstream 11580 true Chr03: 48140208-48151787 Phaseolus vulgaris
Phvul.003G244900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 48140208-48142207 Phaseolus vulgaris
Phvul.003G244900 2.0kb downstream 2.0kb downstream 11580 true Chr03: 48142208-48153787 Phaseolus vulgaris
Phvul.003G244900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 48151788-48153787 Phaseolus vulgaris
Phvul.003G244900 5.0kb upstream 5.0kb upstream 14580 true Chr03: 48137208-48151787 Phaseolus vulgaris
Phvul.003G244900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 48137208-48142207 Phaseolus vulgaris
Phvul.003G244900 5.0kb downstream 5.0kb downstream 14580 true Chr03: 48142208-48156787 Phaseolus vulgaris
Phvul.003G244900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 48151788-48156787 Phaseolus vulgaris
Phvul.003G244900 10.0kb upstream 10.0kb upstream 19580 true Chr03: 48132208-48151787 Phaseolus vulgaris
Phvul.003G244900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 48132208-48142207 Phaseolus vulgaris
Phvul.003G244900 10.0kb downstream 10.0kb downstream 19580 true Chr03: 48142208-48161787 Phaseolus vulgaris
Phvul.003G244900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 48151788-48161787 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299947 5265 Fabidae View MSA
124067431 5270 Rosid View MSA
123740622 5271 Pentapetalae View MSA
122789780 5272 Eudicot View MSA
122043274 5273 Angiosperm View MSA
121347817 5274 Embryophyte View MSA
123424448 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.0693 0.0 36.4586   High
cufflinks 7.04531 0.0 18.9413    
cufflinks 9.50078 0.0 24.9899    
cufflinks 6.25015 0.0 16.9918    
cufflinks 7.96128 0.0 21.2584    
cufflinks 6.82458 0.0 18.3788    
cufflinks 9.89218 0.0 25.954    
cufflinks 6.85462 0.0 18.4417    
cufflinks 6.94598 0.0 18.6896    
cufflinks 24.4043 0.0 63.3494   High
cufflinks 7.44102 0.0 19.9652    

0 Strain