Gene : Phvul.003G296900 P. vulgaris v2.1
Genomic Order:  3017 Name:  ? Phvul.003G296900
Secondary Identifier:  ? PAC:37144697
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G296900 0.5kb upstream 0.5kb upstream 5576 true Chr03: 53374007-53379582 Phaseolus vulgaris
Phvul.003G296900 0.5kb upstream 0.5kb upstream 500 false Chr03: 53374007-53374506 Phaseolus vulgaris
Phvul.003G296900 0.5kb downstream 0.5kb downstream 5576 true Chr03: 53374507-53380082 Phaseolus vulgaris
Phvul.003G296900 0.5kb downstream 0.5kb downstream 500 false Chr03: 53379583-53380082 Phaseolus vulgaris
Phvul.003G296900 1.0kb upstream 1.0kb upstream 6076 true Chr03: 53373507-53379582 Phaseolus vulgaris
Phvul.003G296900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 53373507-53374506 Phaseolus vulgaris
Phvul.003G296900 1.0kb downstream 1.0kb downstream 6076 true Chr03: 53374507-53380582 Phaseolus vulgaris
Phvul.003G296900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 53379583-53380582 Phaseolus vulgaris
Phvul.003G296900 2.0kb upstream 2.0kb upstream 7076 true Chr03: 53372507-53379582 Phaseolus vulgaris
Phvul.003G296900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 53372507-53374506 Phaseolus vulgaris
Phvul.003G296900 2.0kb downstream 2.0kb downstream 7076 true Chr03: 53374507-53381582 Phaseolus vulgaris
Phvul.003G296900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 53379583-53381582 Phaseolus vulgaris
Phvul.003G296900 5.0kb upstream 5.0kb upstream 10076 true Chr03: 53369507-53379582 Phaseolus vulgaris
Phvul.003G296900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 53369507-53374506 Phaseolus vulgaris
Phvul.003G296900 5.0kb downstream 5.0kb downstream 10076 true Chr03: 53374507-53384582 Phaseolus vulgaris
Phvul.003G296900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 53379583-53384582 Phaseolus vulgaris
Phvul.003G296900 10.0kb upstream 10.0kb upstream 15076 true Chr03: 53364507-53379582 Phaseolus vulgaris
Phvul.003G296900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 53364507-53374506 Phaseolus vulgaris
Phvul.003G296900 10.0kb downstream 10.0kb downstream 15076 true Chr03: 53374507-53389582 Phaseolus vulgaris
Phvul.003G296900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 53379583-53389582 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299242 5265 Fabidae View MSA
124064546 5270 Rosid View MSA
123740345 5271 Pentapetalae View MSA
122790196 5272 Eudicot View MSA
122045175 5273 Angiosperm View MSA
121351591 5274 Embryophyte View MSA
123427027 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.43611 0.0 7.42219    
cufflinks 4.56379 0.0 12.9961    
cufflinks 1.03593 0.0 3.47859   Low
cufflinks 1.66732 0.0 5.36883    
cufflinks 2.56329 0.0 7.85946    
cufflinks 1.38103 0.0 4.49761   Low
cufflinks 3.96864 0.0 11.4506    
cufflinks 5.36388 0.0 14.9733   High
cufflinks 3.48364 0.0 10.2144    
cufflinks 5.02729 0.0 14.1949   High
cufflinks 2.72993 0.0 8.27153    

0 Strain