Gene : Phvul.003G296200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10133:SF22 - 5'-3' EXONUCLEASE FAMILY PROTEIN Genomic Order:  3010
Name:  ? Phvul.003G296200 Secondary Identifier:  ? PAC:37148270
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G296200 0.5kb upstream 0.5kb upstream 10511 true Chr03: 53297282-53307792 Phaseolus vulgaris
Phvul.003G296200 0.5kb upstream 0.5kb upstream 500 false Chr03: 53307293-53307792 Phaseolus vulgaris
Phvul.003G296200 0.5kb downstream 0.5kb downstream 10511 true Chr03: 53296782-53307292 Phaseolus vulgaris
Phvul.003G296200 0.5kb downstream 0.5kb downstream 500 false Chr03: 53296782-53297281 Phaseolus vulgaris
Phvul.003G296200 1.0kb upstream 1.0kb upstream 11011 true Chr03: 53297282-53308292 Phaseolus vulgaris
Phvul.003G296200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 53307293-53308292 Phaseolus vulgaris
Phvul.003G296200 1.0kb downstream 1.0kb downstream 11011 true Chr03: 53296282-53307292 Phaseolus vulgaris
Phvul.003G296200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 53296282-53297281 Phaseolus vulgaris
Phvul.003G296200 2.0kb upstream 2.0kb upstream 12011 true Chr03: 53297282-53309292 Phaseolus vulgaris
Phvul.003G296200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 53307293-53309292 Phaseolus vulgaris
Phvul.003G296200 2.0kb downstream 2.0kb downstream 12011 true Chr03: 53295282-53307292 Phaseolus vulgaris
Phvul.003G296200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 53295282-53297281 Phaseolus vulgaris
Phvul.003G296200 5.0kb upstream 5.0kb upstream 15011 true Chr03: 53297282-53312292 Phaseolus vulgaris
Phvul.003G296200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 53307293-53312292 Phaseolus vulgaris
Phvul.003G296200 5.0kb downstream 5.0kb downstream 15011 true Chr03: 53292282-53307292 Phaseolus vulgaris
Phvul.003G296200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 53292282-53297281 Phaseolus vulgaris
Phvul.003G296200 10.0kb upstream 10.0kb upstream 20011 true Chr03: 53297282-53317292 Phaseolus vulgaris
Phvul.003G296200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 53307293-53317292 Phaseolus vulgaris
Phvul.003G296200 10.0kb downstream 10.0kb downstream 20011 true Chr03: 53287282-53307292 Phaseolus vulgaris
Phvul.003G296200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 53287282-53297281 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308251 5265 Fabidae View MSA
124063709 5270 Rosid View MSA
123739108 5271 Pentapetalae View MSA
122787577 5272 Eudicot View MSA
122042646 5273 Angiosperm View MSA
121346899 5274 Embryophyte View MSA
123425715 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.82206 0.0 14.0419    
cufflinks 5.39078 0.0 18.4306    
cufflinks 19.7316 0.0 63.4544   High
cufflinks 3.95267 0.0 15.3128    
cufflinks 3.98456 0.0 14.9745    
cufflinks 13.1278 0.0 44.2756   High
cufflinks 3.34426 0.0 10.6282    
cufflinks 4.36501 0.0 15.6341    
cufflinks 2.5863 0.0 8.6415   Low
cufflinks 5.96263 0.0 23.7287    
cufflinks 3.41631 0.0 13.6236    

0 Strain