Gene : Phvul.003G244275 P. vulgaris v2.1
Defline:  (1 of 3) PTHR10891//PTHR10891:SF533 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2481
Name:  ? Phvul.003G244275 Secondary Identifier:  ? PAC:37146274
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G244275 0.5kb upstream 0.5kb upstream 2163 true Chr03: 48039452-48041614 Phaseolus vulgaris
Phvul.003G244275 0.5kb upstream 0.5kb upstream 500 false Chr03: 48039452-48039951 Phaseolus vulgaris
Phvul.003G244275 0.5kb downstream 0.5kb downstream 2163 true Chr03: 48039952-48042114 Phaseolus vulgaris
Phvul.003G244275 0.5kb downstream 0.5kb downstream 500 false Chr03: 48041615-48042114 Phaseolus vulgaris
Phvul.003G244275 1.0kb upstream 1.0kb upstream 2663 true Chr03: 48038952-48041614 Phaseolus vulgaris
Phvul.003G244275 1.0kb upstream 1.0kb upstream 1000 false Chr03: 48038952-48039951 Phaseolus vulgaris
Phvul.003G244275 1.0kb downstream 1.0kb downstream 2663 true Chr03: 48039952-48042614 Phaseolus vulgaris
Phvul.003G244275 1.0kb downstream 1.0kb downstream 1000 false Chr03: 48041615-48042614 Phaseolus vulgaris
Phvul.003G244275 2.0kb upstream 2.0kb upstream 3663 true Chr03: 48037952-48041614 Phaseolus vulgaris
Phvul.003G244275 2.0kb upstream 2.0kb upstream 2000 false Chr03: 48037952-48039951 Phaseolus vulgaris
Phvul.003G244275 2.0kb downstream 2.0kb downstream 3663 true Chr03: 48039952-48043614 Phaseolus vulgaris
Phvul.003G244275 2.0kb downstream 2.0kb downstream 2000 false Chr03: 48041615-48043614 Phaseolus vulgaris
Phvul.003G244275 5.0kb upstream 5.0kb upstream 6663 true Chr03: 48034952-48041614 Phaseolus vulgaris
Phvul.003G244275 5.0kb upstream 5.0kb upstream 5000 false Chr03: 48034952-48039951 Phaseolus vulgaris
Phvul.003G244275 5.0kb downstream 5.0kb downstream 6663 true Chr03: 48039952-48046614 Phaseolus vulgaris
Phvul.003G244275 5.0kb downstream 5.0kb downstream 5000 false Chr03: 48041615-48046614 Phaseolus vulgaris
Phvul.003G244275 10.0kb upstream 10.0kb upstream 11663 true Chr03: 48029952-48041614 Phaseolus vulgaris
Phvul.003G244275 10.0kb upstream 10.0kb upstream 10000 false Chr03: 48029952-48039951 Phaseolus vulgaris
Phvul.003G244275 10.0kb downstream 10.0kb downstream 11663 true Chr03: 48039952-48051614 Phaseolus vulgaris
Phvul.003G244275 10.0kb downstream 10.0kb downstream 10000 false Chr03: 48041615-48051614 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253627 5265 Fabidae View MSA
124064178 5270 Rosid View MSA
123753496 5271 Pentapetalae View MSA
122789442 5272 Eudicot View MSA
122047176 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 75.055 0.0 205.274 High High
cufflinks 6.34376 0.0 17.7531    
cufflinks 6.52386 0.0 18.1954    
cufflinks 21.7055 0.0 56.3031    
cufflinks 8.8433 0.0 24.2665    
cufflinks 3.18488 0.0 9.56822   Low
cufflinks 7.97886 0.0 21.7868    
cufflinks 2.7441 0.0 8.33203   Low
cufflinks 3.177 0.0 9.53369   Low
cufflinks 19.5577 0.0 50.7576    
cufflinks 15.9552 0.0 41.7505    

0 Strain