Gene : Phvul.003G297200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31155:SF9 - ACYL-[ACYL-CARRIER-PROTEIN] DESATURASE 7, CHLOROPLASTIC Genomic Order:  3020
Name:  ? Phvul.003G297200 Secondary Identifier:  ? PAC:37146723
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5147 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5156 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5366 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G297200 0.5kb upstream 0.5kb upstream 4262 true Chr03: 53410182-53414443 Phaseolus vulgaris
Phvul.003G297200 0.5kb upstream 0.5kb upstream 500 false Chr03: 53410182-53410681 Phaseolus vulgaris
Phvul.003G297200 0.5kb downstream 0.5kb downstream 4262 true Chr03: 53410682-53414943 Phaseolus vulgaris
Phvul.003G297200 0.5kb downstream 0.5kb downstream 500 false Chr03: 53414444-53414943 Phaseolus vulgaris
Phvul.003G297200 1.0kb upstream 1.0kb upstream 4762 true Chr03: 53409682-53414443 Phaseolus vulgaris
Phvul.003G297200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 53409682-53410681 Phaseolus vulgaris
Phvul.003G297200 1.0kb downstream 1.0kb downstream 4762 true Chr03: 53410682-53415443 Phaseolus vulgaris
Phvul.003G297200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 53414444-53415443 Phaseolus vulgaris
Phvul.003G297200 2.0kb upstream 2.0kb upstream 5762 true Chr03: 53408682-53414443 Phaseolus vulgaris
Phvul.003G297200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 53408682-53410681 Phaseolus vulgaris
Phvul.003G297200 2.0kb downstream 2.0kb downstream 5762 true Chr03: 53410682-53416443 Phaseolus vulgaris
Phvul.003G297200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 53414444-53416443 Phaseolus vulgaris
Phvul.003G297200 5.0kb upstream 5.0kb upstream 8762 true Chr03: 53405682-53414443 Phaseolus vulgaris
Phvul.003G297200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 53405682-53410681 Phaseolus vulgaris
Phvul.003G297200 5.0kb downstream 5.0kb downstream 8762 true Chr03: 53410682-53419443 Phaseolus vulgaris
Phvul.003G297200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 53414444-53419443 Phaseolus vulgaris
Phvul.003G297200 10.0kb upstream 10.0kb upstream 13762 true Chr03: 53400682-53414443 Phaseolus vulgaris
Phvul.003G297200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 53400682-53410681 Phaseolus vulgaris
Phvul.003G297200 10.0kb downstream 10.0kb downstream 13762 true Chr03: 53410682-53424443 Phaseolus vulgaris
Phvul.003G297200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 53414444-53424443 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314114 5265 Fabidae View MSA
124069229 5270 Rosid View MSA
123745832 5271 Pentapetalae View MSA
122789548 5272 Eudicot View MSA
122047247 5273 Angiosperm View MSA
121347152 5274 Embryophyte View MSA
123428838 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 49.0588 0.0 128.911 High  
cufflinks 64.576 0.0 173.209 High  
cufflinks 128.483 0.0 370.71 High High
cufflinks 139.683 0.0 404.008 High High
cufflinks 49.4117 0.0 129.555 High  
cufflinks 83.0106 0.0 227.829 High  
cufflinks 28.4423 0.0 73.5505 High Low
cufflinks 31.755 0.0 82.2356 High Low
cufflinks 31.4171 0.0 81.3301 High Low
cufflinks 47.1447 0.0 123.567 High  
cufflinks 59.9151 0.0 159.347 High  

0 Strain