Gene : Phvul.003G256600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23070//PTHR23070:SF24 - BCS1 AAA-TYPE ATPASE // SUBFAMILY NOT NAMED Genomic Order:  2612
Name:  ? Phvul.003G256600 Secondary Identifier:  ? PAC:37148370
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G256600 0.5kb upstream 0.5kb upstream 3161 true Chr03: 49611093-49614253 Phaseolus vulgaris
Phvul.003G256600 0.5kb upstream 0.5kb upstream 500 false Chr03: 49611093-49611592 Phaseolus vulgaris
Phvul.003G256600 0.5kb downstream 0.5kb downstream 3161 true Chr03: 49611593-49614753 Phaseolus vulgaris
Phvul.003G256600 0.5kb downstream 0.5kb downstream 500 false Chr03: 49614254-49614753 Phaseolus vulgaris
Phvul.003G256600 1.0kb upstream 1.0kb upstream 3661 true Chr03: 49610593-49614253 Phaseolus vulgaris
Phvul.003G256600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 49610593-49611592 Phaseolus vulgaris
Phvul.003G256600 1.0kb downstream 1.0kb downstream 3661 true Chr03: 49611593-49615253 Phaseolus vulgaris
Phvul.003G256600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 49614254-49615253 Phaseolus vulgaris
Phvul.003G256600 2.0kb upstream 2.0kb upstream 4661 true Chr03: 49609593-49614253 Phaseolus vulgaris
Phvul.003G256600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 49609593-49611592 Phaseolus vulgaris
Phvul.003G256600 2.0kb downstream 2.0kb downstream 4661 true Chr03: 49611593-49616253 Phaseolus vulgaris
Phvul.003G256600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 49614254-49616253 Phaseolus vulgaris
Phvul.003G256600 5.0kb upstream 5.0kb upstream 7661 true Chr03: 49606593-49614253 Phaseolus vulgaris
Phvul.003G256600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 49606593-49611592 Phaseolus vulgaris
Phvul.003G256600 5.0kb downstream 5.0kb downstream 7661 true Chr03: 49611593-49619253 Phaseolus vulgaris
Phvul.003G256600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 49614254-49619253 Phaseolus vulgaris
Phvul.003G256600 10.0kb upstream 10.0kb upstream 12661 true Chr03: 49601593-49614253 Phaseolus vulgaris
Phvul.003G256600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 49601593-49611592 Phaseolus vulgaris
Phvul.003G256600 10.0kb downstream 10.0kb downstream 12661 true Chr03: 49611593-49624253 Phaseolus vulgaris
Phvul.003G256600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 49614254-49624253 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299311 5265 Fabidae View MSA
124072397 5270 Rosid View MSA
123747421 5271 Pentapetalae View MSA
122795594 5272 Eudicot View MSA
122041675 5273 Angiosperm View MSA
121352297 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.82467 0.0 10.9575   High
cufflinks 3.09224 0.0 9.06988    
cufflinks 0.609839 0.0 2.15332   Low
cufflinks 4.4842 0.0 12.6526   High
cufflinks 1.10796 0.0 3.66113    
cufflinks 2.74748 0.0 8.15489    
cufflinks 1.76743 0.0 5.48927    
cufflinks 1.56928 0.0 4.96817    
cufflinks 0.725581 0.0 2.49179   Low
cufflinks 1.90544 0.0 5.9216    
cufflinks 3.50512 0.0 10.1383    

0 Strain