Gene : Phvul.004G000400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10949//PTHR10949:SF11 - LIPOYL SYNTHASE // SUBFAMILY NOT NAMED Genomic Order:  13
Name:  ? Phvul.004G000400 Secondary Identifier:  ? PAC:37163008
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G000400 0.5kb upstream 0.5kb upstream 1325 true Chr04: 82313-83637 Phaseolus vulgaris
Phvul.004G000400 0.5kb upstream 0.5kb upstream 500 false Chr04: 82313-82812 Phaseolus vulgaris
Phvul.004G000400 0.5kb downstream 0.5kb downstream 1325 true Chr04: 82813-84137 Phaseolus vulgaris
Phvul.004G000400 0.5kb downstream 0.5kb downstream 500 false Chr04: 83638-84137 Phaseolus vulgaris
Phvul.004G000400 1.0kb upstream 1.0kb upstream 1825 true Chr04: 81813-83637 Phaseolus vulgaris
Phvul.004G000400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 81813-82812 Phaseolus vulgaris
Phvul.004G000400 1.0kb downstream 1.0kb downstream 1825 true Chr04: 82813-84637 Phaseolus vulgaris
Phvul.004G000400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 83638-84637 Phaseolus vulgaris
Phvul.004G000400 2.0kb upstream 2.0kb upstream 2825 true Chr04: 80813-83637 Phaseolus vulgaris
Phvul.004G000400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 80813-82812 Phaseolus vulgaris
Phvul.004G000400 2.0kb downstream 2.0kb downstream 2825 true Chr04: 82813-85637 Phaseolus vulgaris
Phvul.004G000400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 83638-85637 Phaseolus vulgaris
Phvul.004G000400 5.0kb upstream 5.0kb upstream 5825 true Chr04: 77813-83637 Phaseolus vulgaris
Phvul.004G000400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 77813-82812 Phaseolus vulgaris
Phvul.004G000400 5.0kb downstream 5.0kb downstream 5825 true Chr04: 82813-88637 Phaseolus vulgaris
Phvul.004G000400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 83638-88637 Phaseolus vulgaris
Phvul.004G000400 10.0kb upstream 10.0kb upstream 10825 true Chr04: 72813-83637 Phaseolus vulgaris
Phvul.004G000400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 72813-82812 Phaseolus vulgaris
Phvul.004G000400 10.0kb downstream 10.0kb downstream 10825 true Chr04: 82813-93637 Phaseolus vulgaris
Phvul.004G000400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 83638-93637 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309766 5265 Fabidae View MSA
124065891 5270 Rosid View MSA
123752187 5271 Pentapetalae View MSA
122792178 5272 Eudicot View MSA
122047173 5273 Angiosperm View MSA
121344137 5274 Embryophyte View MSA
123426101 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 178.785 0.0 484.056 High High
cufflinks 64.8821 0.0 167.711 High  
cufflinks 223.391 0.0 614.467 High High
cufflinks 51.3637 0.0 133.099 High  
cufflinks 68.1434 0.0 176.14 High  
cufflinks 106.998 0.0 279.246 High  
cufflinks 9.42973 0.0 27.869   Low
cufflinks 11.5772 0.0 33.5471   Low
cufflinks 13.8427 0.0 39.289   Low
cufflinks 99.2845 0.0 258.582 High  
cufflinks 39.8889 0.0 104.236 High  

0 Strain