Gene : Phvul.003G284500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11969:SF22 - TRANSCRIPTION FACTOR BHLH71-RELATED Genomic Order:  2892
Name:  ? Phvul.003G284500 Secondary Identifier:  ? PAC:37145647
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G284500 0.5kb upstream 0.5kb upstream 3684 true Chr03: 52212038-52215721 Phaseolus vulgaris
Phvul.003G284500 0.5kb upstream 0.5kb upstream 500 false Chr03: 52212038-52212537 Phaseolus vulgaris
Phvul.003G284500 0.5kb downstream 0.5kb downstream 3684 true Chr03: 52212538-52216221 Phaseolus vulgaris
Phvul.003G284500 0.5kb downstream 0.5kb downstream 500 false Chr03: 52215722-52216221 Phaseolus vulgaris
Phvul.003G284500 1.0kb upstream 1.0kb upstream 4184 true Chr03: 52211538-52215721 Phaseolus vulgaris
Phvul.003G284500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 52211538-52212537 Phaseolus vulgaris
Phvul.003G284500 1.0kb downstream 1.0kb downstream 4184 true Chr03: 52212538-52216721 Phaseolus vulgaris
Phvul.003G284500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 52215722-52216721 Phaseolus vulgaris
Phvul.003G284500 2.0kb upstream 2.0kb upstream 5184 true Chr03: 52210538-52215721 Phaseolus vulgaris
Phvul.003G284500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 52210538-52212537 Phaseolus vulgaris
Phvul.003G284500 2.0kb downstream 2.0kb downstream 5184 true Chr03: 52212538-52217721 Phaseolus vulgaris
Phvul.003G284500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 52215722-52217721 Phaseolus vulgaris
Phvul.003G284500 5.0kb upstream 5.0kb upstream 8184 true Chr03: 52207538-52215721 Phaseolus vulgaris
Phvul.003G284500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 52207538-52212537 Phaseolus vulgaris
Phvul.003G284500 5.0kb downstream 5.0kb downstream 8184 true Chr03: 52212538-52220721 Phaseolus vulgaris
Phvul.003G284500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 52215722-52220721 Phaseolus vulgaris
Phvul.003G284500 10.0kb upstream 10.0kb upstream 13184 true Chr03: 52202538-52215721 Phaseolus vulgaris
Phvul.003G284500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 52202538-52212537 Phaseolus vulgaris
Phvul.003G284500 10.0kb downstream 10.0kb downstream 13184 true Chr03: 52212538-52225721 Phaseolus vulgaris
Phvul.003G284500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 52215722-52225721 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299277 5265 Fabidae View MSA
124070189 5270 Rosid View MSA
123749285 5271 Pentapetalae View MSA
122794835 5272 Eudicot View MSA
122051154 5273 Angiosperm View MSA
121350598 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.443782 0.0 2.06568    
cufflinks 4.4621 0.0 16.1098    
cufflinks 16.1835 0.0 46.5267   High
cufflinks 0.435049 0.0 2.03611 Low  
cufflinks 0.903631 0.0 3.95898    
cufflinks 17.2873 0.0 49.3812   High
cufflinks 0.377738 0.0 3.23389 Low  
cufflinks 1.47317 0.0 7.17206    
cufflinks 0.33412 0.0 1.57315 Low  
cufflinks 0.698372 0.0 3.04629    
cufflinks 0.770231 0.0 4.44225    

0 Strain