Gene : Phvul.003G283500 P. vulgaris v2.1
Defline:  (1 of 1) K09658 - dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit (DPM2) Genomic Order:  2882
Name:  ? Phvul.003G283500 Secondary Identifier:  ? PAC:37146956
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Phaseolus vulgaris pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G283500 0.5kb upstream 0.5kb upstream 3076 true Chr03: 52131955-52135030 Phaseolus vulgaris
Phvul.003G283500 0.5kb upstream 0.5kb upstream 500 false Chr03: 52131955-52132454 Phaseolus vulgaris
Phvul.003G283500 0.5kb downstream 0.5kb downstream 3076 true Chr03: 52132455-52135530 Phaseolus vulgaris
Phvul.003G283500 0.5kb downstream 0.5kb downstream 500 false Chr03: 52135031-52135530 Phaseolus vulgaris
Phvul.003G283500 1.0kb upstream 1.0kb upstream 3576 true Chr03: 52131455-52135030 Phaseolus vulgaris
Phvul.003G283500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 52131455-52132454 Phaseolus vulgaris
Phvul.003G283500 1.0kb downstream 1.0kb downstream 3576 true Chr03: 52132455-52136030 Phaseolus vulgaris
Phvul.003G283500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 52135031-52136030 Phaseolus vulgaris
Phvul.003G283500 2.0kb upstream 2.0kb upstream 4576 true Chr03: 52130455-52135030 Phaseolus vulgaris
Phvul.003G283500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 52130455-52132454 Phaseolus vulgaris
Phvul.003G283500 2.0kb downstream 2.0kb downstream 4576 true Chr03: 52132455-52137030 Phaseolus vulgaris
Phvul.003G283500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 52135031-52137030 Phaseolus vulgaris
Phvul.003G283500 5.0kb upstream 5.0kb upstream 7576 true Chr03: 52127455-52135030 Phaseolus vulgaris
Phvul.003G283500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 52127455-52132454 Phaseolus vulgaris
Phvul.003G283500 5.0kb downstream 5.0kb downstream 7576 true Chr03: 52132455-52140030 Phaseolus vulgaris
Phvul.003G283500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 52135031-52140030 Phaseolus vulgaris
Phvul.003G283500 10.0kb upstream 10.0kb upstream 12576 true Chr03: 52122455-52135030 Phaseolus vulgaris
Phvul.003G283500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 52122455-52132454 Phaseolus vulgaris
Phvul.003G283500 10.0kb downstream 10.0kb downstream 12576 true Chr03: 52132455-52145030 Phaseolus vulgaris
Phvul.003G283500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 52135031-52145030 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312722 5265 Fabidae View MSA
124071671 5270 Rosid View MSA
123741974 5271 Pentapetalae View MSA
122794154 5272 Eudicot View MSA
122048718 5273 Angiosperm View MSA
121349039 5274 Embryophyte View MSA
123381135 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.29009 0.0 23.3436    
cufflinks 5.40964 0.0 17.9881    
cufflinks 5.61442 0.0 18.4907    
cufflinks 11.6525 0.0 35.5869   High
cufflinks 5.96826 0.0 19.7215    
cufflinks 3.27714 0.0 11.5144   Low
cufflinks 5.59398 0.0 18.6184    
cufflinks 7.16601 0.0 23.0314    
cufflinks 4.84604 0.0 16.4471    
cufflinks 4.26796 0.0 14.5841    
cufflinks 8.19814 0.0 26.1632    

0 Strain