Gene : Phvul.003G288800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31631:SF0 - KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN Genomic Order:  2935
Name:  ? Phvul.003G288800 Secondary Identifier:  ? PAC:37146660
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G288800 0.5kb upstream 0.5kb upstream 4344 true Chr03: 52633525-52637868 Phaseolus vulgaris
Phvul.003G288800 0.5kb upstream 0.5kb upstream 500 false Chr03: 52637369-52637868 Phaseolus vulgaris
Phvul.003G288800 0.5kb downstream 0.5kb downstream 4344 true Chr03: 52633025-52637368 Phaseolus vulgaris
Phvul.003G288800 0.5kb downstream 0.5kb downstream 500 false Chr03: 52633025-52633524 Phaseolus vulgaris
Phvul.003G288800 1.0kb upstream 1.0kb upstream 4844 true Chr03: 52633525-52638368 Phaseolus vulgaris
Phvul.003G288800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 52637369-52638368 Phaseolus vulgaris
Phvul.003G288800 1.0kb downstream 1.0kb downstream 4844 true Chr03: 52632525-52637368 Phaseolus vulgaris
Phvul.003G288800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 52632525-52633524 Phaseolus vulgaris
Phvul.003G288800 2.0kb upstream 2.0kb upstream 5844 true Chr03: 52633525-52639368 Phaseolus vulgaris
Phvul.003G288800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 52637369-52639368 Phaseolus vulgaris
Phvul.003G288800 2.0kb downstream 2.0kb downstream 5844 true Chr03: 52631525-52637368 Phaseolus vulgaris
Phvul.003G288800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 52631525-52633524 Phaseolus vulgaris
Phvul.003G288800 5.0kb upstream 5.0kb upstream 8844 true Chr03: 52633525-52642368 Phaseolus vulgaris
Phvul.003G288800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 52637369-52642368 Phaseolus vulgaris
Phvul.003G288800 5.0kb downstream 5.0kb downstream 8844 true Chr03: 52628525-52637368 Phaseolus vulgaris
Phvul.003G288800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 52628525-52633524 Phaseolus vulgaris
Phvul.003G288800 10.0kb upstream 10.0kb upstream 13844 true Chr03: 52633525-52647368 Phaseolus vulgaris
Phvul.003G288800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 52637369-52647368 Phaseolus vulgaris
Phvul.003G288800 10.0kb downstream 10.0kb downstream 13844 true Chr03: 52623525-52637368 Phaseolus vulgaris
Phvul.003G288800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 52623525-52633524 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314081 5265 Fabidae View MSA
124071336 5270 Rosid View MSA
123746292 5271 Pentapetalae View MSA
122790187 5272 Eudicot View MSA
122044690 5273 Angiosperm View MSA
121310328 5274 Embryophyte View MSA
123347843 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.52785 0.0 8.51443   High
cufflinks 0.33927 0.0 1.48276 Low Low
cufflinks 0.375893 0.0 1.59901 Low Low
cufflinks 2.15236 0.0 7.69555   High
cufflinks 0.69707 0.0 3.43176    
cufflinks 2.54907 0.0 10.0579   High
cufflinks 0.824975 0.0 3.75781    
cufflinks 0.561104 0.0 2.73012    
cufflinks 1.18659 0.0 4.83096    
cufflinks 0.303359 0.0 1.35219 Low Low
cufflinks 0.720883 0.0 3.46452    

0 Strain